Assignment of enzyme substrate specificity by principal component analysis of aligned protein sequences: an experimental test using DNA glycosylase homologs (Q73798412)

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scientific article published on 01 July 2000

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English	Assignment of enzyme substrate specificity by principal component analysis of aligned protein sequences: an experimental test using DNA glycosylase homologs	scientific article published on 01 July 2000

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scholarly article

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6 November 2019

Assignment of enzyme substrate specificity by principal component analysis of aligned protein sequences: an experimental test using DNA glycosylase homologs (English)

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6 November 2019

sequence alignment

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based on heuristic

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A Gogos

1

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6 November 2019

D Jantz

2

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6 November 2019

S Sentürker

3

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6 November 2019

D Richardson

4

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6 November 2019

M Dizdaroglu

5

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6 November 2019

N D Clarke

6

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6 November 2019

publication date

1 July 2000

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6 November 2019

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6 November 2019

40

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6 November 2019

1

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6 November 2019

98-105

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6 November 2019

A method to predict functional residues in proteins

1 reference

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New class of enzymes acting on damaged DNA

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Atomic structure of the DNA repair [4Fe-4S] enzyme endonuclease III

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Structural basis for the excision repair of alkylation-damaged DNA

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Three-dimensional structure of a DNA repair enzyme, 3-methyladenine DNA glycosylase II, from Escherichia coli.

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MutY catalytic core, mutant and bound adenine structures define specificity for DNA repair enzyme superfamily

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The C-terminal domain of the adenine-DNA glycosylase MutY confers specificity for 8-oxoguanine.adenine mispairs and may have evolved from MutT, an 8-oxo-dGTPase

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Substrate specificities of the ntg1 and ntg2 proteins of Saccharomyces cerevisiae for oxidized DNA bases are not identical

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Hidden Markov models

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Substrate specificity of the Ogg1 protein of Saccharomyces cerevisiae: excision of guanine lesions produced in DNA by ionizing radiation- or hydrogen peroxide/metal ion-generated free radicals

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Purification and characterization of Escherichia coli endonuclease III from the cloned nth gene

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21 January 2018

Cloning and characterization of a functional human homolog of Escherichia coli endonuclease III

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Purification and properties of the alkylation repair DNA glycosylase encoded the MAG gene from Saccharomyces cerevisiae.

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Base excision of oxidative purine and pyrimidine DNA damage in Saccharomyces cerevisiae by a DNA glycosylase with sequence similarity to endonuclease III from Escherichia coli

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Repair of oxidized DNA bases in the yeast Saccharomyces cerevisiae

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21 January 2018

Identifiers

10.1002/(SICI)1097-0134(20000701)40:1<98::AID-PROT110>3.0.CO;2-S

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10813834%20AND%20SRC:MED&resulttype=core&format=json

6 November 2019

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10813834%20AND%20SRC:MED&resulttype=core&format=json

6 November 2019

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