Host factor titration by chromosomal R-loops as a mechanism for runaway plasmid replication in transcription termination-defective mutants of Escherichia coli (Q73880037)

From Wikidata

Jump to navigation Jump to search

scientific article published on 01 September 2003

Language	Label	Description	Also known as
English	Host factor titration by chromosomal R-loops as a mechanism for runaway plasmid replication in transcription termination-defective mutants of Escherichia coli	scientific article published on 01 September 2003

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

Host factor titration by chromosomal R-loops as a mechanism for runaway plasmid replication in transcription termination-defective mutants of Escherichia coli (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

Escherichia coli

1 reference

based on heuristic

inferred from title

author name string

R Harinarayanan

1

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

J Gowrishankar

2

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

publication date

1 September 2003

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

Journal of Molecular Biology

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

332

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

1

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

31-46

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

D-loops and R-loops: alternative mechanisms for the initiation of chromosome replication in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Escherichia coli RecG and RecA proteins in R-loop formation.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Overexpression of RNase H partially complements the growth defect of an Escherichia coli delta topA mutant: R-loop formation is a major problem in the absence of DNA topoisomerase I

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

DNA topoisomerases regulate R-loop formation during transcription of the rrnB operon in Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Escherichia coli DNA topoisomerase I inhibits R-loop formation by relaxing transcription-induced negative supercoiling.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

R-loop-dependent hypernegative supercoiling in Escherichia coli topA mutants preferentially occurs at low temperatures and correlates with growth inhibition

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Isolation of the topB gene encoding DNA topoisomerase III as a multicopy suppressor of topA null mutations in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

RNase H overproduction corrects a defect at the level of transcription elongation during rRNA synthesis in the absence of DNA topoisomerase I in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

ColE1 replication control circuitry: sense from antisense

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Mutations in a new chromosomal gene of Escherichia coli K-12, pcnB, reduce plasmid copy number of pBR322 and its derivatives.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

The Escherichia coli pcnB gene promotes adenylylation of antisense RNAI of ColE1-type plasmids in vivo and degradation of RNAI decay intermediates

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

The RecG branch migration protein of Escherichia coli dissociates R-loops.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

ATP-dependent resolution of R-loops at the ColE1 replication origin by Escherichia coli RecG protein, a Holliday junction-specific helicase

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

An integrated model of the transcription complex in elongation, termination, and editing

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Transcription termination and anti-termination in E. coli

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Rho-dependent termination and ATPases in transcript termination

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Termination efficiency at rho-dependent terminators depends on kinetic coupling between RNA polymerase and rho

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Requirement for E. coli NusG protein in factor-dependent transcription termination

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Interaction of RNA polymerase and rho in transcription termination: coupled ATPase

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Amber suA mutations which relieve polarity

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Correlation between the serine sensitivity and the derepressibility of the ilv genes in Escherichia coli relA- mutants

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Transcriptional polarity enhances the contribution of the internal promoter, ilvEp, in the expression of the ilvGMEDA operon in wild-type Escherichia coli K12.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Mini-mu bacteriophage with plasmid replicons for in vivo cloning and lac gene fusing

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Effects on mRNA degradation by Escherichia coli transcription termination factor Rho and pBR322 copy number control protein Rop.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Genetics and sequence analysis of the pcnB locus, an Escherichia coli gene involved in plasmid copy number control

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Effects of different alleles of the E. coli K12 pol A gene on the replication of non-transferring plasmids

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Mapping and sequencing of mutations in the Escherichia colirpoB gene that lead to rifampicin resistance

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Allele-specific suppression of ColE1 high-copy-number mutants by a rpoB mutation of Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

The chromatin-associated protein H-NS.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Probing the structure, function, and interactions of the Escherichia coli H-NS and StpA proteins by using dominant negative derivatives.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Oligomerization of the chromatin-structuring protein H-NS.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

H-NS oligomerization domain structure reveals the mechanism for high order self-association of the intact protein

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

The nucleoid-associated DNA-binding protein H-NS is required for the efficient adaptation of Escherichia coli K-12 to a cold environment

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Antiterminator-dependent modulation of transcription elongation rates by NusB and NusG

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Requirement for NusG for transcription antitermination in vivo by the lambda N protein

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Crystal structures of transcription factor NusG in light of its nucleic acid- and protein-binding activities

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Escherichia coli nusG mutations that block transcription termination by coliphage HK022 Nun protein

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Escherichia coli RNA polymerase mutants that enhance or diminish the SOS response constitutively expressed in the absence of RNase HI activity

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Escherichia coli CspA-family RNA chaperones are transcription antiterminators

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

In vivo expression from the RpoS-dependent P1 promoter of the osmotically regulated proU operon in Escherichia coli and Salmonella enterica serovar Typhimurium: activation by rho and hns mutations and by cold stress

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Synthesis of linear plasmid multimers in Escherichia coli K-12.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Identification and characterization of recD, a gene affecting plasmid maintenance and recombination in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Control of primer formation for ColE1 plasmid replication: conformational change of the primer transcript

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Regulation of DNA superhelicity by rpoB mutations that suppress defective Rho-mediated transcription termination in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Incompatibility of Escherichia coli rho mutants with plasmids is mediated by plasmid-specific transcription.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Instability of pUC19 in Escherichia coli transcription termination factor mutant, rho026

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Runaway-replication plasmids as tools to produce large quantities of proteins from cloned genes in bacteria

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Quantitation of ColE1-encoded replication elements

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Formation of an RNA primer for initiation of replication of ColE1 DNA by ribonuclease H

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Specific cleavage of the p15A primer precursor by ribonuclease H at the origin of DNA replication

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Factor-independent termination of transcription in a stretch of deoxyadenosine residues in the template DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Activation of stable DNA replication in rapidly growing Escherichia coli at the time of entry to stationary phase

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Multiple mechanisms for initiation of ColE1 DNA replication: DNA synthesis in the presence and absence of ribonuclease H

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

A structural model of transcription elongation

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Ribosomal protein S4 is a transcription factor with properties remarkably similar to NusA, a protein involved in both non-ribosomal and ribosomal RNA antitermination.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Escherichia coli protein analogs StpA and H-NS: regulatory loops, similar and disparate effects on nucleic acid dynamics

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Identification and sequence determination of the host factor gene for bacteriophage Q beta

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Construction and characterization of new cloning vehicle. II. A multipurpose cloning system

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Construction and characterization of new cloning vehicles VI. Plasmid pBR329, a new derivative of pBR328 lacking the 482-base-pair inverted duplication

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

ColE1-type vectors with fully repressible replication

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Low copy number plasmids for regulated low-level expression of cloned genes in Escherichia coli with blue/white insert screening capability

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

New method for generating deletions and gene replacements in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Mutational analysis and secondary structure model of the RNP1-like sequence motif of transcription termination factor Rho.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

An N-terminally truncated RpoS (sigma(S)) protein in Escherichia coli is active in vivo and exhibits normal environmental regulation even in the absence of rpoS transcriptional and translational control signals

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Evidence that mutations in the suA polarity suppressing gene directly affect termination factor rho

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

based on heuristic

inferred from DOI database lookup

Identification of osmoresponsive genes in Escherichia coli: evidence for participation of potassium and proline transport systems in osmoregulation.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900753-8

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1016/S0022-2836(03)00753-8

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q73880037&oldid=1784061058"