NO rebinding to myoglobin: a reactive molecular dynamics study (Q74487550)

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11 November 2019

title

NO rebinding to myoglobin: a reactive molecular dynamics study (English)

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11 November 2019

4

Martin Karplus

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11 November 2019

1

Markus Meuwly

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11 November 2019

author name string

Oren M Becker

series ordinal

2

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11 November 2019

Roland Stote

series ordinal

3

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11 November 2019

publication date

1 July 2002

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11 November 2019

published in

Biophysical Chemistry

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11 November 2019

volume

98

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11 November 2019

issue

1-2

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11 November 2019

page(s)

183-207

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Dynamics of ligand binding to myoglobin

11 November 2019

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Ultrafast relaxation in picosecond photolysis of nitrosylhemoglobin

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Femtosecond photolysis of CO-ligated protoheme and hemoproteins: appearance of deoxy species with a 350-fsec time constant

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Protein states and proteinquakes

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Rebinding and relaxation in the myoglobin pocket

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Direct observations of ligand dynamics in hemoglobin by subpicosecond infrared spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Ligand binding to heme proteins: connection between dynamics and function

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Ligand binding and protein relaxation in heme proteins: a room temperature analysis of NO geminate recombination.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Molecular dynamics simulation of photodissociation of carbon monoxide from hemoglobin

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Dynamics of myoglobin: comparison of simulation results with neutron scattering spectra

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

A novel neuronal messenger molecule in brain: the free radical, nitric oxide

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Biological roles of nitric oxide

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

1 reference

7 January 2021

X-ray structure and refinement of carbon-monoxy (Fe II)-myoglobin at 1.5 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Stereochemistry of Cooperative Effects in Haemoglobin: Haem–Haem Interaction and the Problem of Allostery

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Hemoglobin tertiary structural change on ligand binding. Its role in the co-operative mechanism

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Mechanisms of cooperativity and allosteric regulation in proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Multiple conformational states of proteins: a molecular dynamics analysis of myoglobin

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Temperature dependence of the structure and dynamics of myoglobin. A simulation approach

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Computational studies of ligand diffusion in globins: I. Leghemoglobin

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Nonexponential relaxation after ligand dissociation from myoglobin: a molecular dynamics simulation.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Nonexponential protein relaxation: dynamics of conformational change in myoglobin

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Simulation of the kinetics of ligand binding to a protein by molecular dynamics: geminate rebinding of nitric oxide to myoglobin.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Theoretical studies of enzymic reactions: dielectric, electrostatic and steric stabilization of the carbonium ion in the reaction of lysozyme

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

A combined quantum mechanical and molecular mechanical potential for molecular dynamics simulations

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Substrate conformational transitions in the active site of chorismate mutase: their role in the catalytic mechanism

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Simulation of enzyme reactions using valence bond force fields and other hybrid quantum/classical approaches

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Morphing ab initio potentials: A systematic study of Ne–HF

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

DFT Computation of the Intrinsic Barrier to CO Geminate Recombination with Heme Compounds

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Active site dynamics of ribonuclease

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Solvent effects on protein motion and protein effects on solvent motion. Dynamics of the active site region of lysozyme

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Comparison of simple potential functions for simulating liquid water

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Cavities and packing defects in the structural dynamics of myoglobin

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

A comparison between molecular dynamics and X-ray results for dissociated CO in myoglobin.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Crystal structures of myoglobin-ligand complexes at near-atomic resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Valence Bond Concepts Applied to the Molecular Mechanics Description of Molecular Shapes. 3. Applications to Transition Metal Alkyls and Hydrides

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

UFF, a full periodic table force field for molecular mechanics and molecular dynamics simulations

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Nitrosylmetalloporphyrins. II. Synthesis and molecular stereochemistry of nitrosyl-.alpha.,.beta.,.gamma.,.delta.-tetraphenylporphinatoiron(II)

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Nitrosylmetalloporphyrins. III. Synthesis and molecular stereochemistry of nitrosyl-.alpha.,.beta.,.gamma.,.delta.-tetraphenylporphinato(1-methylimidazole)iron(II)

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

An infrared study of nitric oxide bonding to heme B and hemoglobin A. Evidence for inositol hexaphosphate induced cleavage of proximal histidine to iron bonds

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Is bound carbonyl linear or bent in heme proteins? Evidence from resonance Raman and infrared spectroscopic data

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

The kinetics and equilibria of the reactions of nitric oxide with sheep haemoglobin.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Heme proteins. II. Preparation and thermodynamic properties of sperm whale myoglobin

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Equilibrium Geometries and Electronic Structure of Iron−Porphyrin Complexes: A Density Functional Study

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

Is the CO adduct of myoglobin bent, and does it matter?

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900093-5

7 January 2021

10.1016/S0301-4622(02)00093-5

Identifiers

DOI

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11 November 2019

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