Site-specific integration of Agrobacterium tumefaciens T-DNA via double-stranded intermediates (Q79150814)

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19 December 2019

title

Site-specific integration of Agrobacterium tumefaciens T-DNA via double-stranded intermediates (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14551323%20AND%20SRC:MED&resulttype=core&format=json

Agrobacterium tumefaciens

19 December 2019

main subject

object named as

Agrobacterium tumefaciens

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4

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19 December 2019

author name string

Tzvi Tzfira

series ordinal

1

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19 December 2019

Leah Renée Frankman

series ordinal

2

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19 December 2019

Manjusha Vaidya

series ordinal

3

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19 December 2019

publication date

9 October 2003

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19 December 2019

number of pages

13

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inferred from page(s)

published in

Plant Physiology

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19 December 2019

volume

133

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19 December 2019

issue

3

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19 December 2019

page(s)

1011-1023

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The basic domain of plant B-ZIP proteins facilitates import of a reporter protein into plant nuclei

19 December 2019

cites work

1 reference

12 December 2020

Site-Specific Nick in the T-DNA Border Sequence as a Result of Agrobacterium vir Gene Expression

1 reference

12 December 2020

Association of single-stranded transferred DNA from Agrobacterium tumefaciens with tobacco cells

1 reference

12 December 2020

Initiation of Agrobacterium tumefaciens T-DNA processing. Purified proteins VirD1 and VirD2 catalyze site- and strand-specific cleavage of superhelical T-border DNA in vitro

1 reference

12 December 2020

Activation of the T-DNA transfer process in Agrobacterium results in the generation of a T-strand-protein complex: Tight association of VirD2 with the 5' ends of T-strands

1 reference

12 December 2020

Genetic manipulation of genomes with rare-cutting endonucleases

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12 December 2020

Genome-wide insertional mutagenesis of Arabidopsis thaliana

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12 December 2020

T-DNA integration into the Arabidopsis genome depends on sequences of pre-insertion sites

1 reference

12 December 2020

Efficient co-transformation of Nicotiana tabacum by two independent T-DNAs, the effect of T-DNA size and implications for genetic separation

1 reference

12 December 2020

Nucleic acid transport in plant-microbe interactions: the molecules that walk through the walls

1 reference

12 December 2020

The structures of integration sites in transgenic rice

1 reference

12 December 2020

Predicting DNA duplex stability from the base sequence

1 reference

12 December 2020

Non-homologous end-joining proteins are required for Agrobacterium T-DNA integration

1 reference

12 December 2020

Nuclear import of Agrobacterium VirD2 and VirE2 proteins in maize and tobacco

1 reference

12 December 2020

Import of Agrobacterium T-DNA into plant nuclei: two distinct functions of VirD2 and VirE2 proteins

1 reference

12 December 2020

Integration of Agrobacterium tumefaciens T-DNA in the Saccharomyces cerevisiae genome by illegitimate recombination

1 reference

12 December 2020

Formation of a putative relaxation intermediate during T-DNA processing directed by the Agrobacterium tumefaciens VirD1,D2 endonuclease

1 reference

12 December 2020

Genetic requirements for the targeted integration of Agrobacterium T-DNA in Saccharomyces cerevisiae

1 reference

12 December 2020

Association of the virD2 protein with the 5' end of T strands in Agrobacterium tumefaciens

1 reference

12 December 2020

Nuclear localization of Agrobacterium VirE2 protein in plant cells

1 reference

12 December 2020

Two T-DNA's co-transformed intoBrassica napus by a doubleAgrobacterium tumefaciens infection are mainly integrated at the same locus

1 reference

12 December 2020

From host recognition to T-DNA integration: the function of bacterial and plant genes in the Agrobacterium-plant cell interaction

1 reference

12 December 2020

Site-specific cleavage and joining of single-stranded DNA by VirD2 protein of Agrobacterium tumefaciens Ti plasmids: analogy to bacterial conjugation

1 reference

12 December 2020

The introduction and expression of transgenes in plants

1 reference

12 December 2020

Bacterial type IV secretion: conjugation systems adapted to deliver effector molecules to host cells

1 reference

12 December 2020

Integration of Agrobacterium T-DNA into a tobacco chromosome: possible involvement of DNA homology between T-DNA and plant DNA

1 reference

12 December 2020

The transfer of DNA from agrobacterium tumefaciens into plants: a feast of fundamental insights

1 reference

12 December 2020

Recombination between prokaryotic and eukaryotic DNA: integration of Agrobacterium tumefaciens T-DNA into the plant genome.

1 reference

12 December 2020

Cooperative interaction of Agrobacterium VirE2 protein with single-stranded DNA: implications for the T-DNA transfer process

1 reference

12 December 2020

The DNA sequences of T-DNA junctions suggest that complex T-DNA loci are formed by a recombination process resembling T-DNA integration

1 reference

12 December 2020

Mobilization of T-DNA from Agrobacterium to plant cells involves a protein that binds single-stranded DNA

1 reference

12 December 2020

The VirD2 protein of Agrobacterium tumefaciens carries nuclear localization signals important for transfer of T-DNA to plant

1 reference

12 December 2020

Curved DNA without A-A: experimental estimation of all 16 DNA wedge angles

1 reference

12 December 2020

Palindromic sequences and A+T-rich DNA elements promote illegitimate recombination in Nicotiana tabacum

1 reference

12 December 2020

Agrobacterium tumefaciens virE operon encodes a single-stranded DNA-binding protein

1 reference

12 December 2020

Transgene integration in aspen: structures of integration sites and mechanism of T-DNA integration

1 reference

12 December 2020

GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants

1 reference

12 December 2020

Agrobacterium tumefaciens transfers single-stranded transferred DNA (T-DNA) into the plant cell nucleus

1 reference

12 December 2020

Plant enzymes but not Agrobacterium VirD2 mediate T-DNA ligation in vitro

1 reference

12 December 2020

Partners-in-infection: host proteins involved in the transformation of plant cells by Agrobacterium

1 reference

12 December 2020

DNA transfer from Agrobacterium to plant cells in crown gall tumor disease

1 reference

12 December 2020

Early transcription of Agrobacterium T-DNA genes in tobacco and maize

1 reference

12 December 2020

T-DNA integration patterns in co-transformed plant cells suggest that T-DNA repeats originate from co-integration of separate T-DNAs

1 reference

12 December 2020

Purification and characterization of the in vitro activity of I-Sce I, a novel and highly specific endonuclease encoded by a group I intron

1 reference

12 December 2020

When X-ray-inducible proteins meet DNA double strand break repair

1 reference

12 December 2020

VirB/D4-dependent protein translocation from Agrobacterium into plant cells

1 reference

12 December 2020

Host recognition by the VirA, VirG two-component regulatory proteins of agrobacterium tumefaciens

1 reference

12 December 2020

The Agrobacterium tumefaciens virulence D2 protein is responsible for precise integration of T-DNA into the plant genome

1 reference

12 December 2020

The Arabidopsis AtLIG4 gene is required for the repair of DNA damage, but not for the integration of Agrobacterium T-DNA

1 reference

12 December 2020

Ku80‐ and DNA ligase IV‐deficient plants are sensitive to ionizing radiation and defective in T‐DNA integration

1 reference

12 December 2020

Capture of genomic and T-DNA sequences during double-strand break repair in somatic plant cells

1 reference

12 December 2020

Agrobacterium-mediated plant transformation: the biology behind the "gene-jockeying" tool

1 reference

12 December 2020

AGROBACTERIUM AND PLANT GENES INVOLVED IN T-DNA TRANSFER AND INTEGRATION

1 reference

12 December 2020

Cooperative binding of Agrobacterium tumefaciens VirE2 protein to single-stranded DNA.

1 reference

12 December 2020

Illegitimate recombination in plants: a model for T-DNA integration

1 reference

12 December 2020

Integration of Agrobacterium tumefaciens transfer DNA (T-DNA) involves rearrangements of target plant DNA sequences

1 reference

12 December 2020

A simple and general method for transferring genes into plants

1 reference

12 December 2020

Interstitial deletions and intrachromosomal amplification initiated from a double-strand break targeted to a mammalian chromosome

1 reference

12 December 2020

Agrobacterium VirE2 proteins can form a complex with T strands in the plant cytoplasm.

1 reference

12 December 2020

The VirD2 pilot protein of Agrobacterium-transferred DNA interacts with the TATA box-binding protein and a nuclear protein kinase in plants

1 reference

12 December 2020

Engineering bacterial competitiveness and persistence in the phytosphere.

1 reference

12 December 2020

T-DNA integration: a mode of illegitimate recombination in plants

1 reference

12 December 2020

The VirD2 protein of A. tumefaciens contains a C-terminal bipartite nuclear localization signal: Implications for nuclear uptake of DNA in plant cells

1 reference

12 December 2020

VIP1, an Arabidopsis protein that interacts with Agrobacterium VirE2, is involved in VirE2 nuclear import and Agrobacterium infectivity

1 reference

12 December 2020

Localized transient expression of GUS in leaf discs following cocultivation with Agrobacterium.

1 reference

12 December 2020

Tumor induction by Agrobacterium tumefaciens: analysis of the boundaries of T-DNA.

1 reference

12 December 2020

The molecular structure of agrobacterium VirE2-single stranded DNA complexes involved in nuclear import

1 reference

12 December 2020

Agrobacterium tumefaciens T-complex transport apparatus: a paradigm for a new family of multifunctional transporters in eubacteria

1 reference

12 December 2020

Enhancement of transformation rates in higher plants by low-dose irradiation: Are DNA repair systems involved in the incorporation of exogenous DNA into the plant genome?

1 reference

12 December 2020

Gene stability in transgenic aspen (Populus). II. Molecular characterization of variable expression of transgene in wild and hybrid aspen

1 reference

12 December 2020

Agrobacterium-plant cell DNA transport: have virulence proteins, will travel

1 reference

12 December 2020

Agrobacterium T-strand production in vitro: sequence-specific cleavage and 5' protection of single-stranded DNA templates by purified VirD2 protein

1 reference

12 December 2020

Generic trans-kingdom sex?

1 reference

12 December 2020

Single-Stranded DNA Binding Protein Encoded by the virE Locus of Agrobacterium tumefaciens.

1 reference

12 December 2020

Direct repeats of T-DNA integrated in tobacco chromosome: characterization of junction regions

1 reference

12 December 2020

The Agrobacterium tumefaciens virE2 gene product is a single-stranded-DNA-binding protein that associates with T-DNA.

1 reference

12 December 2020

Identifiers

DOI

10.1104/PP.103.032128

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14551323%20AND%20SRC:MED&resulttype=core&format=json

release_uzfsy3355vbgvmgvtlmt7wd5va

19 December 2019

Fatcat ID

0 references

PMC publication ID

281598

0 references

1 reference