Genomics in cereals: from genome-wide conserved orthologous set (COS) sequences to candidate genes for trait dissection (Q84164705)

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1 February 2020

title

Genomics in cereals: from genome-wide conserved orthologous set (COS) sequences to candidate genes for trait dissection (English)

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Michael Abrouk

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author name string

Stéphanie Bolot

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Caroline Pont

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Mickael Throude

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Nicolas Guilhot

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Carole Confolent

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Fernanda Bortolini

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Sébastien Praud

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Alain Murigneux

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Gilles Charmet

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Jerome Salse

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publication date

3 July 2009

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Functional and Integrative Genomics

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published in

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volume

9

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issue

4

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page(s)

473-484

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https://scigraph.springernature.com/pub.10.1007/s10142-009-0129-8

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exact match

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Combining bioinformatics and phylogenetics to identify large sets of single-copy orthologous genes (COSII) for comparative, evolutionary and systematic studies: a test case in the euasterid plant clade

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Identification and characterization of shared duplications between rice and wheat provide new insight into grass genome evolution

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The pseudo-response regulator Ppd-H1 provides adaptation to photoperiod in barley

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A large rearrangement involving genes and low-copy DNA interrupts the microcollinearity between rice and barley at the Rph7 locus

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Comparative DNA sequence analysis of mapped wheat ESTs reveals the complexity of genome relationships between rice and wheat

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New in silico insight into the synteny between rice (Oryza sativa L.) and maize (Zea mays L.) highlights reshuffling and identifies new duplications in the rice genome

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Convergent domestication of cereal crops by independent mutations at corresponding genetic Loci

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The Genomes of Oryza sativa: a history of duplications

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The barley stem rust-resistance gene Rpg1 is a novel disease-resistance gene with homology to receptor kinases

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Positional cloning of the wheat vernalization gene VRN1

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LineUp: statistical detection of chromosomal homology with application to plant comparative genomics

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Comparative analysis of QTLs affecting plant height and maturity across the Poaceae, in reference to an interspecific sorghum population.

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Physical and genetic structure of the maize genome reflects its complex evolutionary history

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Genetic analysis of grain protein-content, grain yield and thousand-kernel weight in bread wheat

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Single-copy genes define a conserved order between rice and wheat for understanding differences caused by duplication, deletion, and transposition of genes

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Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes

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Targeted mapping of a sugarcane rust resistance gene (Bru1) using bulked segregant analysis and AFLP markers

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PCR-based landmark unique gene (PLUG) markers effectively assign homoeologous wheat genes to A, B and D genomes

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12 December 2020