Quantitative analysis of protein phosphorylation on a system-wide scale by mass spectrometry-based proteomics (Q85195020)

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15 February 2020

title

Quantitative analysis of protein phosphorylation on a system-wide scale by mass spectrometry-based proteomics (English)

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15 February 2020

1

Bernd Bodenmiller

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15 February 2020

2

Ruedi Aebersold

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15 February 2020

publication date

1 March 2010

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15 February 2020

published in

Methods in Enzymology

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15 February 2020

volume

470

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15 February 2020

page(s)

317-334

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describes a project that uses

15 February 2020

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Mass spectrometry in proteomics

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Mass spectrometry-based proteomics

1 reference

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Isolation of phosphoproteins by immobilized metal (Fe3+) affinity chromatography

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The effects of mass accuracy, data acquisition speed, and search algorithm choice on peptide identification rates in phosphoproteomics

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Large-scale characterization of HeLa cell nuclear phosphoproteins

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PhosphoPep--a phosphoproteome resource for systems biology research in Drosophila Kc167 cells

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Reproducible isolation of distinct, overlapping segments of the phosphoproteome

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7 January 2021

An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells

1 reference

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7 January 2021

Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics

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Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

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Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae

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Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway

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Quantitation of phosphopeptides using affinity chromatography and stable isotope labeling

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7 January 2021

Characterization of the rapamycin-sensitive phosphoproteome reveals that Sch9 is a central coordinator of protein synthesis

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Signaling--2000 and beyond

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The protein kinases of budding yeast: six score and more

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Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

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Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns.

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7 January 2021

Global and site-specific quantitative phosphoproteomics: principles and applications

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7 January 2021

Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry.

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7 January 2021

SuperHirn - a novel tool for high resolution LC-MS-based peptide/protein profiling

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7 January 2021

An assessment of software solutions for the analysis of mass spectrometry based quantitative proteomics data

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7 January 2021

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

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7 January 2021

Probability-based protein identification by searching sequence databases using mass spectrometry data

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7 January 2021

Selective Isolation at the Femtomole Level of Phosphopeptides from Proteolytic Digests Using 2D-NanoLC-ESI-MS/MS and Titanium Oxide Precolumns

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7 January 2021

Global analysis of protein phosphorylation in yeast

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7 January 2021

An integrated mass spectrometric and computational framework for the analysis of protein interaction networks.

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7 January 2021

A neutral loss activation method for improved phosphopeptide sequence analysis by quadrupole ion trap mass spectrometry

1 reference

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7 January 2021

Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry

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7 January 2021

Comparative analysis reveals conserved protein phosphorylation networks implicated in multiple diseases

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2970013-6

7 January 2021

Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry

1 reference

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7 January 2021

SIMAC (sequential elution from IMAC), a phosphoproteomics strategy for the rapid separation of monophosphorylated from multiply phosphorylated peptides

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2970013-6

7 January 2021

Enrichment and separation of mono- and multiply phosphorylated peptides using sequential elution from IMAC prior to mass spectrometric analysis

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2970013-6

7 January 2021

Sch9 is a major target of TORC1 in Saccharomyces cerevisiae

1 reference

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7 January 2021

A systematic approach to the analysis of protein phosphorylation

1 reference

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7 January 2021

10.1016/S0076-6879(10)70013-6

Identifiers

DOI

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15 February 2020

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