The organization of genome duplication is a critical determinant of the landscape of genome maintenance (Q89207234)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29934426%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

title

The organization of genome duplication is a critical determinant of the landscape of genome maintenance (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29934426%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

main subject

whole genome duplication

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2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29934426%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

author name string

Blanca Gómez-Escoda

series ordinal

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29934426%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

publication date

22 June 2018

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29934426%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29934426%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

volume

28

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29934426%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

issue

8

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29934426%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

page(s)

1179-1192

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29934426%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

1 April 2020

RStudio

1 reference

18 June 2022

https://europepmc.org/article/PMC/6071636

inferred from PubMed Central ID database lookup

cites work

Genetics of the fission yeast Schizosaccharomyces pombe

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12 December 2020

Molecular genetic analysis of fission yeast Schizosaccharomyces pombe

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12 December 2020

A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli

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12 December 2020

The NDA3 gene of fission yeast encodes β-tubulin: A cold-sensitive nda3 mutation reversibly blocks spindle formation and chromosome movement in mitosis

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12 December 2020

Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism

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12 December 2020

Synergistic actions of Rad51 and Rad52 in recombination and DNA repair

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12 December 2020

Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe

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12 December 2020

A Mec1- and Rad53-dependent checkpoint controls late-firing origins of DNA replication

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12 December 2020

Regulation of DNA-replication origins during cell-cycle progression

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12 December 2020

Binding of double-strand breaks in DNA by human Rad52 protein

1 reference

12 December 2020

ATR disruption leads to chromosomal fragmentation and early embryonic lethality

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12 December 2020

Temporally coordinated assembly and disassembly of replication factories in the absence of DNA synthesis

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12 December 2020

Rad52 forms DNA repair and recombination centers during S phase

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12 December 2020

Role of RAD52 epistasis group genes in homologous recombination and double-strand break repair

1 reference

12 December 2020

Fission yeast Cdc23/Mcm10 functions after pre-replicative complex formation to promote Cdc45 chromatin binding

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12 December 2020

ATR and ATM regulate the timing of DNA replication origin firing

1 reference

12 December 2020

Chk1 is haploinsufficient for multiple functions critical to tumor suppression

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12 December 2020

Inhibition of human Chk1 causes increased initiation of DNA replication, phosphorylation of ATR targets, and DNA breakage

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12 December 2020

DNA replication origins fire stochastically in fission yeast

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12 December 2020

Genomic mapping of single-stranded DNA in hydroxyurea-challenged yeasts identifies origins of replication

1 reference

12 December 2020

Basic methods for fission yeast

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12 December 2020

Rad4TopBP1, a scaffold protein, plays separate roles in DNA damage and replication checkpoints and DNA replication

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12 December 2020

Genome-wide characterization of fission yeast DNA replication origins

1 reference

12 December 2020

Genome-wide localization of pre-RC sites and identification of replication origins in fission yeast

1 reference

12 December 2020

Replication in hydroxyurea: it's a matter of time

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12 December 2020

DNA combing reveals intrinsic temporal disorder in the replication of yeast chromosome VI.

1 reference

12 December 2020

Checkpoint independence of most DNA replication origins in fission yeast

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12 December 2020

Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification.

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12 December 2020

An oncogene-induced DNA damage model for cancer development

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12 December 2020

The temporal program of chromosome replication: genomewide replication in clb5{Delta} Saccharomyces cerevisiae

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12 December 2020

Global reorganization of replication domains during embryonic stem cell differentiation

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12 December 2020

Establishing the program of origin firing during S phase in fission Yeast.

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12 December 2020

Human mutation rate associated with DNA replication timing

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12 December 2020

Additions, losses, and rearrangements on the evolutionary route from a reconstructed ancestor to the modern Saccharomyces cerevisiae genome

1 reference

12 December 2020

Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis

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12 December 2020

Impact of replication timing on non-CpG and CpG substitution rates in mammalian genomes

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12 December 2020

Fragile genomic sites are associated with origins of replication.

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12 December 2020

Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types

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12 December 2020

Homologous Recombination Restarts Blocked Replication Forks at the Expense of Genome Rearrangements by Template Exchange

1 reference

12 December 2020

Checkpoint-dependent inhibition of DNA replication initiation by Sld3 and Dbf4 phosphorylation

1 reference

12 December 2020

Damage-induced phosphorylation of Sld3 is important to block late origin firing

1 reference

12 December 2020

Chk1 inhibits replication factory activation but allows dormant origin firing in existing factories.

1 reference

12 December 2020

The effect of the intra-S-phase checkpoint on origins of replication in human cells

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12 December 2020

Sld7, an Sld3-associated protein required for efficient chromosomal DNA replication in budding yeast

1 reference

12 December 2020

Nucleotide deficiency promotes genomic instability in early stages of cancer development

1 reference

12 December 2020

Mutation rates across budding yeast chromosome VI are correlated with replication timing

1 reference

12 December 2020

Limiting replication initiation factors execute the temporal programme of origin firing in budding yeast.

1 reference

12 December 2020

Surviving chromosome replication: the many roles of the S-phase checkpoint pathway

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12 December 2020

dNTP pools determine fork progression and origin usage under replication stress

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12 December 2020

Rif1 is a global regulator of timing of replication origin firing in fission yeast

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12 December 2020

Replication stress-induced chromosome breakage is correlated with replication fork progression and is preceded by single-stranded DNA formation

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12 December 2020

Conservation of replication timing reveals global and local regulation of replication origin activity

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12 December 2020

Mouse Rif1 is a key regulator of the replication-timing programme in mammalian cells

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12 December 2020

Rif1 regulates the replication timing domains on the human genome

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12 December 2020

Differential relationship of DNA replication timing to different forms of human mutation and variation

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12 December 2020

Mapping genomic hotspots of DNA damage by a single-strand-DNA-compatible and strand-specific ChIP-seq method.

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12 December 2020

DNA replication timing, genome stability and cancer: late and/or delayed DNA replication timing is associated with increased genomic instability.

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12 December 2020

DNA replication timing and higher-order nuclear organization determine single-nucleotide substitution patterns in cancer genomes

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12 December 2020

DNA replication timing

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12 December 2020

Causes of genome instability

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12 December 2020

ATR prohibits replication catastrophe by preventing global exhaustion of RPA.

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12 December 2020

ATR activates the S-M checkpoint during unperturbed growth to ensure sufficient replication prior to mitotic onset

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12 December 2020

Causes and consequences of replication stress

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12 December 2020

Replication origin selection regulates the distribution of meiotic recombination

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12 December 2020

Cellular regulation of ribonucleotide reductase in eukaryotes

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12 December 2020

Break-seq reveals hydroxyurea-induced chromosome fragility as a result of unscheduled conflict between DNA replication and transcription

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12 December 2020

The spatial and temporal organization of origin firing during the S-phase of fission yeast

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12 December 2020

A global profile of replicative polymerase usage

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12 December 2020

DNA replication origin activation in space and time

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12 December 2020

Dynamic changes in replication timing and gene expression during lineage specification of human pluripotent stem cells.

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12 December 2020

Nuclear Architecture Organized by Rif1 Underpins the Replication-Timing Program

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12 December 2020

A short G1 phase imposes constitutive replication stress and fork remodelling in mouse embryonic stem cells.

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12 December 2020

Replicating Large Genomes: Divide and Conquer

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12 December 2020

Unprotected Replication Forks Are Converted into Mitotic Sister Chromatid Bridges.

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12 December 2020

Identifiers

DOI

10.1101/GR.224527.117

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29934426%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29934426%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

PubMed publication ID

29934426

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