Diel patterning in the bacterial community associated with the sea anemone Nematostella vectensis (Q90170663)

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11 April 2020

title

Diel patterning in the bacterial community associated with the sea anemone Nematostella vectensis (English)

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Nematostella vectensis

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Tyler J Carrier

2

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11 April 2020

publication date

13 August 2019

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number of pages

13

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inferred from page(s)

published in

Ecology and Evolution

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volume

9

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issue

17

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page(s)

9935-9947

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describes a project that uses

11 April 2020

DESeq2

object named as

DESeq2

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

A secreted antibacterial neuropeptide shapes the microbiome of Hydra

1 reference

7 January 2021

Trimmomatic: a flexible trimmer for Illumina sequence data

1 reference

7 January 2021

Uncovering the evolutionary history of innate immunity: the simple metazoan Hydra uses epithelial cells for host defence

1 reference

7 January 2021

Lunar Phase Modulates Circadian Gene Expression Cycles in the Broadcast Spawning Coral Acropora millepora

1 reference

7 January 2021

Sea anemone model has a single Toll-like receptor that can function in pathogen detection, NF-κB signal transduction, and development

1 reference

7 January 2021

Season structures prokaryotic partners but not algal symbionts in subtropical hard corals

1 reference

7 January 2021

QIIME allows analysis of high-throughput community sequencing data

1 reference

7 January 2021

The Hologenome Across Environments and the Implications of a Host-Associated Microbial Repertoire

1 reference

7 January 2021

Blue light for infectious diseases: Propionibacterium acnes, Helicobacter pylori, and beyond?

1 reference

7 January 2021

Circadian Disruption Changes Gut Microbiome Taxa and Functional Gene Composition.

1 reference

7 January 2021

Predicted Bacterial Interactions Affect in Vivo Microbial Colonization Dynamics in Nematostella.

1 reference

7 January 2021

Molecular bases for circadian clocks

1 reference

7 January 2021

UCHIME improves sensitivity and speed of chimera detection

1 reference

7 January 2021

MyD88-deficient Hydra reveal an ancient function of TLR signaling in sensing bacterial colonizers

1 reference

7 January 2021

Bacteria-bacteria interactions within the microbiota of the ancestral metazoan Hydra contribute to fungal resistance

1 reference

7 January 2021

Why bacteria matter in animal development and evolution

1 reference

7 January 2021

Using Nematostella vectensis to Study the Interactions between Genome, Epigenome, and Bacteria in a Changing Environment

1 reference

7 January 2021

The Unique, Widely Distributed, Estuarine Sea Anemone, Nematostella vectensis Stephenson: A Review, New Facts, and Questions

1 reference

7 January 2021

Microbial diversity and activity in the Nematostella vectensis holobiont: insights from 16S rRNA gene sequencing, isolate genomes, and a pilot-scale survey of gene expression

1 reference

7 January 2021

The Metronome of Symbiosis: Interactions Between Microbes and the Host Circadian Clock

1 reference

7 January 2021

Bacterial bioluminescence regulates expression of a host cryptochrome gene in the squid-Vibrio symbiosis.

1 reference

7 January 2021

Characterization of circadian behavior in the starlet sea anemone, Nematostella vectensis

1 reference

7 January 2021

Circadian rhythms, sleep, and metabolism

1 reference

7 January 2021

The plant circadian clock influences rhizosphere community structure and function

1 reference

7 January 2021

JTK_CYCLE: an efficient nonparametric algorithm for detecting rhythmic components in genome-scale data sets

1 reference

7 January 2021

A circadian clock in macrophages controls inflammatory immune responses.

1 reference

7 January 2021

Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors.

1 reference

7 January 2021

Multi-component complement system of Cnidaria: C3, Bf, and MASP genes expressed in the endodermal tissues of a sea anemone, Nematostella vectensis

1 reference

7 January 2021

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

1 reference

7 January 2021

Experience matters: prior exposure to plant toxins enhances diversity of gut microbes in herbivores.

1 reference

7 January 2021

Defining the Origins of the NOD-Like Receptor System at the Base of Animal Evolution

1 reference

7 January 2021

Transcriptome-wide analysis of differential gene expression in response to light:dark cycles in a model cnidarian.

1 reference

7 January 2021

Transcriptional remodelling upon light removal in a model cnidarian: Losses and gains in gene expression

1 reference

7 January 2021

Effects of diurnal variation of gut microbes and high-fat feeding on host circadian clock function and metabolism

1 reference

7 January 2021

Rhythmicity of the intestinal microbiota is regulated by gender and the host circadian clock

1 reference

7 January 2021

UniFrac: a new phylogenetic method for comparing microbial communities

1 reference

7 January 2021

Daily cycle in oxygen consumption by the sea anemone Nematostella vectensis Stephenson

1 reference

7 January 2021

Life history and eco-evolutionary dynamics in light of the gut microbiota

1 reference

7 January 2021

Developmental biology in marine invertebrate symbioses

1 reference

7 January 2021

The innate immune repertoire in cnidaria--ancestral complexity and stochastic gene loss.

1 reference

7 January 2021

Response of bacterial colonization in Nematostella vectensis to development, environment and biogeography

1 reference

7 January 2021

Knowing your friends: invertebrate innate immunity fosters beneficial bacterial symbioses.

1 reference

7 January 2021

Host-Microbe Coevolution: Applying Evidence from Model Systems to Complex Marine Invertebrate Holobionts

1 reference

7 January 2021

Profiling molecular and behavioral circadian rhythms in the non-symbiotic sea anemone Nematostella vectensis

1 reference

7 January 2021

Developmental and light-entrained expression of melatonin and its relationship to the circadian clock in the sea anemone Nematostella vectensis

1 reference

7 January 2021

Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization

1 reference

7 January 2021

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

1 reference

7 January 2021

Light entrained rhythmic gene expression in the sea anemone Nematostella vectensis: the evolution of the animal circadian clock

1 reference

7 January 2021

Genomic survey of candidate stress-response genes in the estuarine anemone Nematostella vectensis

1 reference

7 January 2021

Temporal and histological evaluation of melatonin patterns in a 'basal' metazoan

1 reference

7 January 2021

Occurrence, diel patterns, and the influence of melatonin on the photosynthetic performance of cultured Symbiodinium

1 reference

7 January 2021

Beyond the Venn diagram: the hunt for a core microbiome

1 reference

7 January 2021

Season, but not symbiont state, drives microbiome structure in the temperate coral Astrangia poculata.

1 reference

7 January 2021

Neutrality in the Metaorganism.

1 reference

7 January 2021

Bacterial Community Associated with the Reef Coral Mussismilia braziliensis's Momentum Boundary Layer over a Diel Cycle

1 reference

7 January 2021

The gut microbiota--masters of host development and physiology

1 reference

7 January 2021

Circadian clocks in symbiotic corals: the duet between Symbiodinium algae and their coral host

1 reference

7 January 2021

Photosynthetic circadian rhythmicity patterns of Symbiodinium, [corrected] the coral endosymbiotic algae.

1 reference

7 January 2021

Two alleles of NF-kappaB in the sea anemone Nematostella vectensis are widely dispersed in nature and encode proteins with distinct activities

1 reference

7 January 2021

Evidence for rapid, tide-related shifts in the microbiome of the coral Coelastrea aspera

1 reference

7 January 2021

Transkingdom control of microbiota diurnal oscillations promotes metabolic homeostasis.

1 reference

7 January 2021

The microbiome and innate immunity

1 reference

7 January 2021

Stochastic assembly produces heterogeneous communities in the Caenorhabditis elegans intestine

1 reference

7 January 2021

Transcriptome analysis of the circadian regulatory network in the coral Acropora millepora.

1 reference

7 January 2021

Transcriptional patterns in both host and bacterium underlie a daily rhythm of anatomical and metabolic change in a beneficial symbiosis

1 reference

7 January 2021

Characterization of the core elements of the NF-κB signaling pathway of the sea anemone Nematostella vectensis

1 reference

7 January 2021

Light exposure influences the diurnal oscillation of gut microbiota in mice

1 reference

7 January 2021

The characterization of sponge NLRs provides insight into the origin and evolution of this innate immune gene family in animals

1 reference

7 January 2021

Diet and feeding pattern affect the diurnal dynamics of the gut microbiome

1 reference

7 January 2021

PEAR: a fast and accurate Illumina Paired-End reAd mergeR.

1 reference

7 January 2021

Identifiers

DOI

10.1002/ECE3.5534

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31534705%20AND%20SRC:MED&resulttype=core&format=json

11 April 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31534705%20AND%20SRC:MED&resulttype=core&format=json

11 April 2020

PubMed publication ID

31534705

1 reference