Pathological priming causes developmental gene network heterochronicity in autistic subject-derived neurons (Q90929165)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30617258%20AND%20SRC:MED&resulttype=core&format=json

17 April 2020

title

Pathological priming causes developmental gene network heterochronicity in autistic subject-derived neurons (English)

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1

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Manching Ku

5

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17 April 2020

Thomas J M Kuret

7

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Abed AlFatah Mansour

9

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17 April 2020

Baptiste N Jaeger

10

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Jerome Mertens

13

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Fred Gage

14

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2

Apua C M Paquola

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11

Maria C Marchetto

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author name string

Shani Stern

3

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17 April 2020

David Gosselin

4

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17 April 2020

Monique Pena

6

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17 April 2020

Marvin Liyanage

8

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17 April 2020

Christopher K Glass

12

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publication date

7 January 2019

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17 April 2020

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17 April 2020

volume

22

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issue

2

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17 April 2020

page(s)

243-255

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describes a project that uses

17 April 2020

Cytoscape

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9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

RStudio

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18 June 2022

https://europepmc.org/article/PMC/6402576

inferred from PubMed Central ID database lookup

cites work

Advancing the understanding of autism disease mechanisms through genetics

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Integrative functional genomic analyses implicate specific molecular pathways and circuits in autism

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Coexpression networks implicate human midfetal deep cortical projection neurons in the pathogenesis of autism

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Evidence of brain overgrowth in the first year of life in autism

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Mapping Early Brain Development in Autism

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Functional neuroimaging of high-risk 6-month-old infants predicts a diagnosis of autism at 24 months of age.

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Early brain development in infants at high risk for autism spectrum disorder

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Altered proliferation and networks in neural cells derived from idiopathic autistic individuals

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

FOXG1-Dependent Dysregulation of GABA/Glutamate Neuron Differentiation in Autism Spectrum Disorders

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

SHANK3 and IGF1 restore synaptic deficits in neurons from 22q13 deletion syndrome patients

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

A quantitative framework to evaluate modeling of cortical development by neural stem cells

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Cell-surface marker signatures for the isolation of neural stem cells, glia and neurons derived from human pluripotent stem cells

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

A general framework for weighted gene co-expression network analysis

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

WGCNA: an R package for weighted correlation network analysis

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Dynamic programming algorithm optimization for spoken word recognition

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

AutDB: a gene reference resource for autism research

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Transcriptomic analysis of autistic brain reveals convergent molecular pathology

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

The contribution of de novo coding mutations to autism spectrum disorder

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Cerebral organoids model human brain development and microcephaly

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Brain-Region-Specific Organoids Using Mini-bioreactors for Modeling ZIKV Exposure

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Neuronal subtype specification in the cerebral cortex

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Encoding and decoding time in neural development

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

A novel F box protein, NFB42, is highly enriched in neurons and induces growth arrest

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Loss of F-box only protein 2 (Fbxo2) disrupts levels and localization of select NMDA receptor subunits, and promotes aberrant synaptic connectivity.

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Rasd2 Modulates Prefronto-Striatal Phenotypes in Humans and 'Schizophrenia-Like Behaviors' in Mice.

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Essential Role of Linx/Islr2 in the Development of the Forebrain Anterior Commissure.

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Linx mediates interaxonal interactions and formation of the internal capsule

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Rapid single-step induction of functional neurons from human pluripotent stem cells

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Integrative analysis of 111 reference human epigenomes

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Predicting spatial and temporal gene expression using an integrative model of transcription factor occupancy and chromatin state

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

A high-resolution map of the three-dimensional chromatin interactome in human cells

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Age-dependent brain gene expression and copy number anomalies in autism suggest distinct pathological processes at young versus mature ages

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Transcriptome analysis reveals dysregulation of innate immune response genes and neuronal activity-dependent genes in autism

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Histone Acetylome-wide Association Study of Autism Spectrum Disorder.

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Rates, distribution and implications of postzygotic mosaic mutations in autism spectrum disorder

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Early brain overgrowth in autism associated with an increase in cortical surface area before age 2 years

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Longitudinal magnetic resonance imaging study of cortical development through early childhood in autism

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Neuroanatomic observations of the brain in autism: a review and future directions

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Autism and abnormal development of brain connectivity.

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Localized enlargement of the frontal cortex in early autism

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Minicolumnar pathology in autism

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Protracted dendritic growth in the typically developing human amygdala and increased spine density in young ASD brains.

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Altering the trajectory of early postnatal cortical development can lead to structural and behavioural features of autism

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Auditory-cued sensorimotor task reveals disengagement deficits in rats exposed to the autism-associated teratogen valproic acid.

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Direct conversion of fibroblasts to functional neurons by defined factors

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Cell divisions are not essential for the direct conversion of fibroblasts into neuronal cells

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Mouse embryonic stem cells can differentiate via multiple paths to the same state.

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

GAT: a simulation framework for testing the association of genomic intervals

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Induction of pluripotent stem cells from adult human fibroblasts by defined factors

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

A Model for Neural Development and Treatment of Rett Syndrome Using Human Induced Pluripotent Stem Cells

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Trimmomatic: a flexible trimmer for Illumina sequence data

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

STAR: ultrafast universal RNA-seq aligner

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Gene network interconnectedness and the generalized topological overlap measure

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R.

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Aligning gene expression time series with time warping algorithms

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Cytoscape: a software environment for integrated models of biomolecular interaction networks

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Identifying biological themes within lists of genes with EASE

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Fast gapped-read alignment with Bowtie 2

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

deepTools2: a next generation web server for deep-sequencing data analysis

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Differential oestrogen receptor binding is associated with clinical outcome in breast cancer

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Visualizing Genomic Data Using Gviz and Bioconductor

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

1 reference

https://api.crossref.org/works/10.1038%2FS41593-018-0295-X

7 January 2021

10.1038/S41593-018-0295-X

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30617258%20AND%20SRC:MED&resulttype=core&format=json

17 April 2020

1 reference

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17 April 2020

PubMed publication ID

30617258

1 reference