Metabolic reconstruction for metagenomic data and its application to the human microbiome (Q21092513)

7

object named as

Beltran Rodriguez-Mueller

Beltran

Rodriguez-Mueller

1 reference

15 August 2022

Sahar Abubucker

1

Sahar

Abubucker

1 reference

15 August 2022

Johannes Goll

3

Johannes

Goll

1 reference

15 August 2022

Alyxandria M Schubert

4

Alyxandria M

Schubert

1 reference

15 August 2022

Brandi L Cantarel

6

Brandi L

Cantarel

1 reference

15 August 2022

Owen White

11

Owen

White

1 reference

15 August 2022

Barbara Methé

13

Barbara

PLOS Computational Biology

Methé

1 reference

15 August 2022

language of work or name

English

0 references

publication date

2012

0 references

published in

0 references

volume

8

0 references

page(s)

e1002358

0 references

issue

6

0 references

copyright license

Creative Commons Attribution 4.0 International

start time

13 June 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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A parsimony approach to biological pathway reconstruction/inference for genomes and metagenomes

19 March 2017

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Quantifying environmental adaptation of metabolic pathways in metagenomics

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Search and clustering orders of magnitude faster than BLAST

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Toward molecular trait-based ecology through integration of biogeochemical, geographical and metagenomic data

7 April 2017

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Optimizing read mapping to reference genomes to determine composition and species prevalence in microbial communities

10 May 2017

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12 September 2017

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Complex carbohydrate utilization by the healthy human microbiome

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12 September 2017

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A metagenomic β-glucuronidase uncovers a core adaptive function of the human intestinal microbiome.

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Metabolic-network-driven analysis of bacterial ecological strategies

12 September 2017

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Statistical methods for detecting differentially abundant features in clinical metagenomic samples

12 September 2017

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12 September 2017

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New multidimensional functional diversity indices for a multifaceted framework in functional ecology

12 September 2017

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The role of microbiota in infectious disease

12 September 2017

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12 September 2017

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12 September 2017

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12 September 2017

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IMG/M: a data management and analysis system for metagenomes

12 September 2017

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Use of simulated data sets to evaluate the fidelity of metagenomic processing methods

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374609

Critical review of published microarray studies for cancer outcome and guidelines on statistical analysis and reporting

12 September 2017

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Bacterial flavodoxins support nitric oxide production by Bacillus subtilis nitric-oxide synthase.

12 September 2017

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Therapeutic value of glycosaminoglycans in cancer

12 September 2017

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Functional diversity: back to basics and looking forward

12 September 2017

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Genomic features of lactic acid bacteria effecting bioprocessing and health

12 September 2017

1 reference

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Annotation of metagenome short reads using proxygenes

12 September 2017

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An invitation to the marriage of metagenomics and metabolomics.

30 May 2018

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Beta-glucuronidase in human intestinal microbiota is necessary for the colonic genotoxicity of the food-borne carcinogen 2-amino-3-methylimidazo[4,5-f]quinoline in rats.

29 November 2018

1 reference

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'Everything is everywhere, but, the environment selects'; what did Baas Becking and Beijerinck really say?

29 November 2018

1 reference

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Utilization of putrescine by Streptococcus pneumoniae during growth in choline-limited medium.

29 November 2018

1 reference

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Characterization of a Bacteroides species from human intestine that degrades glycosaminoglycans

29 November 2018

1 reference

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Dermatan sulphate is released by proteinases of common pathogenic bacteria and inactivates antibacterial alpha-defensin

29 November 2018

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12 December 2020

Heparanase upregulation by colonic epithelium in inflammatory bowel disease

1 reference

12 December 2020

Obesity and gut flora

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12 December 2020

Metabolic fate and function of dietary glutamate in the gut

1 reference

12 December 2020

A framework for human microbiome research

1 reference

12 December 2020

Involvement of beta-glucuronidase in intestinal microflora in the intestinal toxicity of the antitumor camptothecin derivative irinotecan hydrochloride (CPT-11) in rats

1 reference

12 December 2020

Genomic features of lactic acid bacteria effecting bioprocessing and health

1 reference

12 December 2020

The zero-frequency problem: estimating the probabilities of novel events in adaptive text compression

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002358

7 January 2021

inferred from DOI database lookup

Low Moments for Small Samples: A Comparative Study of Order Statistics

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002358

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1371/JOURNAL.PCBI.1002358

1 reference

journals/ploscb/AbubuckerSGSICRZTHWKMSGMH12

151124

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

151124

1 reference

1 reference

1 reference