The genes coding for the conversion of carbazole to catechol are flanked by IS6100 elements in Sphingomonas sp. strain XLDN2-5 (Q21136405)

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The Genes Coding for the Conversion of Carbazole to Catechol Are Flanked by IS6100 Elements in Sphingomonas sp. Strain XLDN2-5

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English	The genes coding for the conversion of carbazole to catechol are flanked by IS6100 elements in Sphingomonas sp. strain XLDN2-5	scientific article	The Genes Coding for the Conversion of Carbazole to Catechol Are Flanked by IS6100 Elements in Sphingomonas sp. Strain XLDN2-5

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scholarly article

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The genes coding for the conversion of carbazole to catechol are flanked by IS6100 elements in Sphingomonas sp. strain XLDN2-5 (English)

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8

author given names

Zixin

author last names

Deng

object named as

Zixin Deng

1 reference

PubMed publication ID

17 August 2022

author name string

Zhonghui Gai

1

author given names

Zhonghui

author last names

Gai

1 reference

PubMed publication ID

17 August 2022

Xiaoyu Wang

2

author given names

Xiaoyu

author last names

Wang

1 reference

PubMed publication ID

17 August 2022

Xiaorui Liu

3

author given names

Xiaorui

author last names

Liu

1 reference

PubMed publication ID

17 August 2022

Cui Tai

4

author given names

Cui

author last names

Tai

1 reference

PubMed publication ID

17 August 2022

Hongzhi Tang

5

author given names

Hongzhi

author last names

Tang

1 reference

PubMed publication ID

17 August 2022

Xiaofei He

6

author given names

Xiaofei

author last names

He

1 reference

PubMed publication ID

17 August 2022

Geng Wu

7

author given names

Geng

author last names

Wu

1 reference

PubMed publication ID

17 August 2022

Ping Xu

9

author given names

Ping

author last names

Xu

1 reference

PubMed publication ID

17 August 2022

language of work or name

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publication date

2010

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5

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4

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e10018

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copyright license

Creative Commons Attribution 4.0 International

2 April 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Multiple sequence alignment with the Clustal series of programs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

19 March 2017

Insertion sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

7 April 2017

Degradation of carbazole by microbial cells immobilized in magnetic gellan gum gel beads

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

Cometabolic degradation of dibenzofuran and dibenzothiophene by a newly isolated carbazole-degrading Sphingomonas sp. strain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

The locus coding for the 3-nitrobenzoate dioxygenase of Comamonas sp. strain JS46 is flanked by IS1071 elements and is subject to deletion and inversion events

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

A three-component dicamba O-demethylase from Pseudomonas maltophilia, strain DI-6: gene isolation, characterization, and heterologous expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

Organization of lin genes and IS6100 among different strains of hexachlorocyclohexane-degrading Sphingomonas paucimobilis: evidence for horizontal gene transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

Characterization and regulation of the genes for a novel anthranilate 1,2-dioxygenase from Burkholderia cepacia DBO1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

The unique aromatic catabolic genes in sphingomonads degrading polycyclic aromatic hydrocarbons (PAHs).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

Organization and regulation of pentachlorophenol-degrading genes in Sphingobium chlorophenolicum ATCC 39723.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

Diverse oxygenations catalyzed by carbazole 1,9a-dioxygenase from Pseudomonas sp. Strain CA10.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

Complete sequence of a 184-kilobase catabolic plasmid from Sphingomonas aromaticivorans F199.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

Genetic analysis of dioxin dioxygenase of Sphingomonas sp. Strain RW1: catabolic genes dispersed on the genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

The reductase RedA2 of the multi-component dioxin dioxygenase system of Sphingomonas sp. RW1 is related to class-I cytochrome P450-type reductases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

Integrons found in different locations have identical 5' ends but variable 3' ends

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

Expression of the strA-strB streptomycin resistance genes in Pseudomonas syringae and Xanthomonas campestris and characterization of IS6100 in X. campestris.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

Putidaredoxin reductase and putidaredoxin. Cloning, sequence determination, and heterologous expression of the proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

12 September 2017

Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. strain CA10.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

27 September 2017

Insertion sequence IS6100 on plasmid pOAD2, which degrades nylon oligomers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

27 September 2017

The Sphingomonas plasmid pCAR3 is involved in complete mineralization of carbazole

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

30 May 2018

Plasmid pCAR3 contains multiple gene sets involved in the conversion of carbazole to anthranilate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

30 May 2018

The 27.8-kb R-plasmid pTET3 from Corynebacterium glutamicum encodes the aminoglycoside adenyltransferase gene cassette aadA9 and the regulated tetracycline efflux system Tet 33 flanked by active copies of the widespread insertion sequence IS6100.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

30 May 2018

Partial characterization of a genomic island associated with the multidrug resistance region of Salmonella enterica Typhymurium DT104.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

30 May 2018

Transposition of an antibiotic resistance element in mycobacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848856

30 May 2018

Mutagenic profiles of carbazole in the male germ cells of Swiss albino mice

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0010018

21 January 2018

Isolation and characterization of Sphingomonas sp. GTIN11 capable of carbazole metabolism in petroleum

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0010018

21 January 2018

Degradation of carbazole and its derivatives by a Pseudomonas sp.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0010018

21 January 2018

Cloning and nucleotide sequence of carbazole catabolic genes from Pseudomonas stutzeri strain OM1, isolated from activated sludge

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0010018

21 January 2018

Novel carbazole degradation genes of Sphingomonas CB3: sequence analysis, transcription, and molecular ecology

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0010018

21 January 2018

Microbial transformation of benzothiophenes, with carbazole as the auxiliary substrate, by Sphingomonas sp. strain XLDN2-5.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0010018

21 January 2018

Selective and continuous degradation of carbazole contained in petroleum oil by resting cells of Sphingomonas sp. CDH-7

1 reference

https://pubmed.ncbi.nlm.nih.gov/20368802

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete analysis of genes and enzymes for gamma-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26

1 reference

https://pubmed.ncbi.nlm.nih.gov/20368802

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Aromatic hydrocarbon degradation by Sphingomonas yanoikuyae B1

1 reference

https://pubmed.ncbi.nlm.nih.gov/20368802

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0010018

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2010PLoSO...510018G

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PMC publication ID

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PubMed publication ID

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ResearchGate publication ID

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