Conservation of the links between gene transcription and chromosomal organization in the highly reduced genome of Buchnera aphidicola (Q21266574)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17547756%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

title

Conservation of the links between gene transcription and chromosomal organization in the highly reduced genome of Buchnera aphidicola (English)

1 reference

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31 December 2019

1 reference

3

Didier Remond

Didier

Remond

1 reference

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31 December 2019

5

Yvan Rahbé

Yvan

Rahbé

1 reference

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31 December 2019

6

Gérard Febvay

Gérard

Febvay

1 reference

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31 December 2019

4

Jacques Bernillon

Jacques

Bernillon

1 reference

31 December 2019

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17547756%20AND%20SRC:MED&resulttype=core&format=json

7

Jean-Michel Fayard

Jean-Michel

Fayard

1 reference

31 December 2019

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17547756%20AND%20SRC:MED&resulttype=core&format=json

José Viñuelas

1

José

Viñuelas

1 reference

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31 December 2019

Federica Calevro

series ordinal

2

author given names

Federica

author last names

Calevro

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17547756%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

Hubert Charles

series ordinal

8

author given names

Hubert

author last names

Charles

1 reference

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31 December 2019

language of work or name

English

0 references

publication date

4 June 2007

1 reference

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31 December 2019

1 reference

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31 December 2019

volume

8

1 reference

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31 December 2019

issue

1

0 references

page(s)

143

1 reference

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Long-range periodic patterns in microbial genomes indicate significant multi-scale chromosomal organization.

31 December 2019

cites work

1 reference

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Interruptions in gene expression drive highly expressed operons to the leading strand of DNA replication

19 March 2017

1 reference

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Decoding the nucleoid organisation of Bacillus subtilis and Escherichia coli through gene expression data

19 March 2017

1 reference

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Genomic transcriptional response to loss of chromosomal supercoiling in Escherichia coli

19 March 2017

1 reference

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Spatial patterns of transcriptional activity in the chromosome of Escherichia coli

19 March 2017

1 reference

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Relationship between gene co-expression and probe localization on microarray slides

19 March 2017

1 reference

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Reductive genome evolution in Buchnera aphidicola

19 March 2017

1 reference

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Extreme genome reduction in Buchnera spp.: toward the minimal genome needed for symbiotic life

19 March 2017

1 reference

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The process of genome shrinkage in the obligate symbiont Buchnera aphidicola

19 March 2017

1 reference

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50 Million Years of Genomic Stasis in Endosymbiotic Bacteria

19 March 2017

1 reference

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Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS

19 March 2017

1 reference

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The complete genome sequence of Escherichia coli K-12

19 March 2017

1 reference

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A small microbial genome: the end of a long symbiotic relationship?

19 March 2017

1 reference

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Analysis of genomic context: prediction of functional associations from conserved bidirectionally transcribed gene pairs

19 March 2017

1 reference

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Different levels of transcriptional regulation due to trophic constraints in the reduced genome of Buchnera aphidicola APS.

10 May 2017

1 reference

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Codon usage bias and tRNA over-expression in Buchnera aphidicola after aromatic amino acid nutritional stress on its host Acyrthosiphon pisum

12 September 2017

1 reference

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Hundreds of flagellar basal bodies cover the cell surface of the endosymbiotic bacterium Buchnera aphidicola sp. strain APS.

12 September 2017

1 reference

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Tempo and mode of early gene loss in endosymbiotic bacteria from insects

12 September 2017

1 reference

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Co-expressed yeast genes cluster over a long range but are not regularly spaced

12 September 2017

1 reference

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Determination of the core of a minimal bacterial gene set

12 September 2017

1 reference

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The replication-related organization of bacterial genomes.

12 September 2017

1 reference

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Gene essentiality determines chromosome organisation in bacteria

12 September 2017

1 reference

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Gene Organization: Selection, Selfishness, and Serendipity

12 September 2017

1 reference

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Spurious spatial periodicity of co-expression in microarray data due to printing design

12 September 2017

1 reference

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Genomic DNA standards for gene expression profiling in Mycobacterium tuberculosis

12 September 2017

1 reference

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Is there a role for replication fork asymmetry in the distribution of genes in bacterial genomes?

12 September 2017

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Toward a universal standard: comparing two methods for standardizing spotted microarray data

12 September 2017

1 reference

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Essential genes are more evolutionarily conserved than are nonessential genes in bacteria

12 September 2017

1 reference

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Consequences of replication fork movement through transcription units in vivo

12 September 2017

1 reference

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Mechanisms of transcription-replication collisions in bacteria

12 September 2017

1 reference

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When polymerases collide: replication and the transcriptional organization of the E. coli chromosome

27 September 2017

1 reference

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An experimental validation of orphan genes of Buchnera, a symbiont of aphids

27 September 2017

1 reference

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Gene expression levels influence amino acid usage and evolutionary rates in endosymbiotic bacteria

30 May 2018

1 reference

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Periodic transcriptional organization of the E.coli genome

29 November 2018

1 reference

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Transcription/replication collisions cause bacterial transcription units to be longer on the leading strand of replication

29 November 2018

1 reference

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Assessment of 35mer amino-modified oligonucleotide based microarray with bacterial samples

29 November 2018

1 reference

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From genes to genomes: universal scale-invariant properties of microbial chromosome organisation.

29 November 2018

1 reference

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Essentiality, not expressiveness, drives gene-strand bias in bacteria.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899503

Use of RNA and genomic DNA references for inferred comparisons in DNA microarray analyses

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899503

Essential Genes Are More Evolutionarily Conserved Than Are Nonessential Genes in Bacteria

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899503

Physical and genetic map of the genome of Buchnera, the primary endosymbiont of the pea aphid Acyrthosiphon pisum.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899503

ROSO: optimizing oligonucleotide probes for microarrays

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17547756

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-8-143

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17547756%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

31 December 2019

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-8-143

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17547756%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

PubMed publication ID

17547756

1 reference