Gene Designer: a synthetic biology tool for constructing artificial DNA segments (Q21284253)

Europe PubMed Central

title

Gene Designer: a synthetic biology tool for constructing artificial DNA segments (English)

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1 reference

3

Claes Gustafsson

Claes

Gustafsson

1 reference

18 August 2022

Alan Villalobos

1

Alan

Villalobos

1 reference

18 August 2022

Jon E Ness

series ordinal

2

author given names

Jon E

author last names

Ness

1 reference

18 August 2022

Jeremy Minshull

series ordinal

4

author given names

Jeremy

author last names

Minshull

1 reference

18 August 2022

Sridhar Govindarajan

series ordinal

5

author given names

Sridhar

author last names

Govindarajan

1 reference

JCat: a novel tool to adapt codon usage of a target gene to its potential expression host

18 August 2022

language of work or name

English

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publication date

2006

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published in

BMC Bioinformatics

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volume

7

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issue

1

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page(s)

285

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uses

Gene Designer

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cites work

1 reference

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19 March 2017

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19 March 2017

1 reference

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Accurate multiplex gene synthesis from programmable DNA microchips

19 March 2017

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19 March 2017

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Overexpression of tnaC of Escherichia coli inhibits growth by depleting tRNA2Pro availability

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Initiation of protein synthesis in bacteria

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12 September 2017

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12 September 2017

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12 September 2017

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Stop codons preceded by rare arginine codons are efficient determinants of SsrA tagging in Escherichia coli

12 September 2017

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Codon bias at the 3'-side of the initiation codon is correlated with translation initiation efficiency in Escherichia coli

12 September 2017

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How translational accuracy influences reading frame maintenance

12 September 2017

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The downstream box: an efficient and independent translation initiation signal in Escherichia coli

12 September 2017

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Codon usage in bacteria: correlation with gene expressivity

12 September 2017

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Total synthesis and cloning of a gene coding for the ribonuclease S protein

12 September 2017

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Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system

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12 September 2017

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Nonrandom utilization of codon pairs in Escherichia coli

12 September 2017

1 reference

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12 September 2017

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27 September 2017

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Hierarchy of sequence-dependent features associated with prokaryotic translation

27 September 2017

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30 May 2018

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Codon pair utilization biases influence translational elongation step times

30 May 2018

1 reference

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30 May 2018

1 reference

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30 May 2018

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30 May 2018

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30 May 2018

1 reference

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30 May 2018

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Mistranslational errors associated with the rare arginine codon CGG in Escherichia coli

30 May 2018

1 reference

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29 November 2018

1 reference

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Absence of effect of varying Thr-Leu codon pairs on protein synthesis in a T7 system

29 November 2018

1 reference

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PCR-based gene synthesis as an efficient approach for expression of the A+T-rich malaria genome.

29 November 2018

1 reference

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The Synthetic Gene Designer: a flexible web platform to explore sequence manipulation for heterologous expression

29 November 2018

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12 December 2020

Abortive translation caused by peptidyl-tRNA drop-off at NGG codons in the early coding region of mRNA

1 reference

12 December 2020

Validation of RNAi silencing specificity using synthetic genes: salicylic acid-binding protein 2 is required for innate immunity in plants

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12 December 2020

Cooperative effects by the initiation codon and its flanking regions on translation initiation

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12 December 2020

Codon optimizer: a freeware tool for codon optimization

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12 December 2020

Total Synthesis of the Gene for an Alanine Transfer Ribonucleic Acid from Yeast

1 reference

12 December 2020

The influence of codon context on genetic code translation

1 reference

12 December 2020

Effects of surrounding sequence on the suppression of nonsense codons

1 reference

12 December 2020

Codon context effects in missense suppression

1 reference

12 December 2020

Codon usage determines translation rate in Escherichia coli

1 reference

12 December 2020

mRNAs can be stabilized by DEAD-box proteins

1 reference

12 December 2020

Thermodynamic parameters to predict stability of RNA/DNA hybrid duplexes

1 reference

12 December 2020

Codon optimization of the gene encoding a domain from human type 1 neurofibromin protein results in a threefold improvement in expression level in Escherichia coli

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2105-7-285

1 reference

journals/bmcbi/VillalobosNGMG06

2638399

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

0 references

2638399

1 reference

1 reference

1 reference