A census of human soluble protein complexes (Q24297808)

GOA release 2020-03-11

enzyme binding

1 reference

GOA release 2020-03-11

author

Shoshana Wodak

20

0 references

Sadhna Phanse

Sadhna Phanse

10

0 references

Pingzhao Hu

Pingzhao Hu

13

0 references

Andrew Emili

24

Andrew Emili

0 references

James Vlasblom

15

James Vlasblom

0 references

Elisabeth R. M. Tillier

21

Elisabeth R M Tillier

0 references

author name string

Pierre C Havugimana

1

0 references

G Traver Hart

2

0 references

Tamás Nepusz

3

0 references

Haixuan Yang

4

0 references

Andrei L Turinsky

5

0 references

Zhihua Li

6

0 references

Peggy I Wang

7

0 references

Daniel R Boutz

8

0 references

Vincent Fong

9

0 references

Mohan Babu

11

0 references

Stephanie A Craig

12

0 references

Cuihong Wan

14

0 references

Vaqaar-un-Nisa Dar

16

0 references

Alexandr Bezginov

17

0 references

Gregory W Clark

18

0 references

Gabriel C Wu

19

0 references

Alberto Paccanaro

HSPC117 is the essential subunit of a human tRNA splicing ligase complex

22

0 references

language of work or name

English

0 references

publication date

31 August 2012

0 references

published in

Cell

0 references

volume

150

0 references

issue

5

0 references

page(s)

1068-81

0 references

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Ongoing and future developments at the Universal Protein Resource

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Network organization of the human autophagy system

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Systematic analysis of human protein complexes identifies chromosome segregation proteins

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Mutations and variants in the cohesion factor genes NIPBL, SMC1A, and SMC3 in a cohort of 30 unrelated patients with Cornelia de Lange syndrome

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

LC-MS/MS as an alternative for SDS-PAGE in blue native analysis of protein complexes

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Defining the human deubiquitinating enzyme interaction landscape

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Large-scale mapping of human protein-protein interactions by mass spectrometry

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Functional organization of the yeast proteome by systematic analysis of protein complexes

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Proteome survey reveals modularity of the yeast cell machinery

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Proteome organization in a genome-reduced bacterium

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

From molecular to modular cell biology

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Characteristics of a human cell line transformed by DNA from human adenovirus type 5

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Interactome networks and human disease

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Towards a knowledge-based Human Protein Atlas

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

A human phenome-interactome network of protein complexes implicated in genetic disorders

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Interaction network containing conserved and essential protein complexes in Escherichia coli

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

The genetic association database

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

RAD21 mutations cause a human cohesinopathy

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Improving GO semantic similarity measures by exploring the ontology beneath the terms and modelling uncertainty

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Detecting overlapping protein complexes in protein-protein interaction networks

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Comparative proteomic analysis of eleven common cell lines reveals ubiquitous but varying expression of most proteins

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Deep proteome and transcriptome mapping of a human cancer cell line

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

A protein complex network of Drosophila melanogaster

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Analysis of the human endogenous coregulator complexome.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Prioritizing candidate disease genes by network-based boosting of genome-wide association data.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

A lentiviral functional proteomics approach identifies chromatin remodeling complexes important for the induction of pluripotency

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

CORUM: the comprehensive resource of mammalian protein complexes--2009

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

The human protein coevolution network.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

A map of human protein interactions derived from co-expression of human mRNAs and their orthologs

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Probabilistic assembly of human protein interaction networks from label-free quantitative proteomics

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Analyzing protein function on a genomic scale: the importance of gold-standard positives and negatives for network prediction

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

PRISM, a generic large scale proteomic investigation strategy for mammals

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

HeLa cells 50 years on: the good, the bad and the ugly

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

A fast SEQUEST cross correlation algorithm

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Further case of microdeletion of 8q24 with phenotype overlapping Langer-Giedion without TRPS1 deletion.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Improved proteomic discovery by sample pre-fractionation using dual-column ion-exchange high performance liquid chromatography

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Chromosome rearrangements in cornelia de Lange syndrome (CdLS): report of a der(3)t(3;12)(p25.3;p13.3) in two half sibs with features of CdLS and review of reported CdLS cases with chromosome rearrangements.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Multiple exostoses, mental retardation, hypertrichosis, and brain abnormalities in a boy with a de novo 8q24 submicroscopic interstitial deletion

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

The cell as a collection of protein machines: preparing the next generation of molecular biologists

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3477804

Guilt-by-association goes global

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22939629

12 December 2020

inferred from PubMed ID database lookup

Probabilistic model of the human protein-protein interaction network

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22939629

12 December 2020

inferred from PubMed ID database lookup

A generalized expression for the similarity of spectra: application to powder diffraction pattern classification

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

A cost-benefit analysis of multidimensional fractionation of affinity purification-mass spectrometry samples

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Human Protein Reference Database and Human Proteinpedia as discovery tools for systems biology.

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Using coevolution to predict protein-protein interactions.

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Directed proteomic analysis of the human nucleolus

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Gene ontology: tool for the unification of biology

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

An endoribonuclease-prepared siRNA screen in human cells identifies genes essential for cell division

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Towards a proteome-scale map of the human protein–protein interaction network

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Widespread changes in protein synthesis induced by microRNAs

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Universal sample preparation method for proteome analysis

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Identification of 315 genes essential for early zebrafish development

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Geometric diffusions as a tool for harmonic analysis and structure definition of data: diffusion maps.

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Systematic discovery of nonobvious human disease models through orthologous phenotypes

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

A transition probability model for amino acid substitutions from blocks.

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

PINdb: a database of nuclear protein complexes from human and yeast.

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

OMA Browser--exploring orthologous relations across 352 complete genomes

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

1 reference

7 January 2021

Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

The Database of Interacting Proteins: 2004 update

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Spectral clustering of protein sequences

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

The IntAct molecular interaction database in 2010

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

InParanoid 7: new algorithms and tools for eukaryotic orthology analysis

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

MINT, the molecular interaction database: 2009 update

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

The Mouse Genome Database (MGD): premier model organism resource for mammalian genomics and genetics

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

The BioGRID Interaction Database: 2011 update

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Profiling essential genes in human mammary cells by multiplex RNAi screening

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

An automated method for finding molecular complexes in large protein interaction networks

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Evaluation of clustering algorithms for protein-protein interaction networks

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

iRefIndex: a consolidated protein interaction database with provenance

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2012.08.011

7 January 2021

10.1016/J.CELL.2012.08.011

Identifiers

DOI

1 reference

1 reference

1 reference

PubMed publication ID

22939629

1 reference