Structure-function-folding relationship in a WW domain (Q24550922)

9

object named as

Jeffery W Kelly

0 references

Joseph P Noel

7

object named as

Joseph P Noel

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author name string

Marcus Jäger

1

0 references

Yan Zhang

2

0 references

Jan Bieschke

3

0 references

Houbi Nguyen

4

0 references

Maria Dendle

5

0 references

Marianne E Bowman

Proceedings of the National Academy of Sciences of the United States of America

6

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language of work or name

English

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publication date

11 July 2006

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published in

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volume

103

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issue

28

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page(s)

10648-53

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cites work

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A revised set of potentials for beta-turn formation in proteins

24 March 2017

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Structural analysis of the mitotic regulator hPin1 in solution: insights into domain architecture and substrate binding

24 March 2017

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Turn stability in β-hairpin peptides: Investigation of peptides containing 3:5 type I G1 bulge turns

24 March 2017

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Solution structure and ligand recognition of the WW domain pair of the yeast splicing factor Prp40

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

NMR solution structure of the isolated Apo Pin1 WW domain: comparison to the x-ray crystal structures of Pin1

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Using flexible loop mimetics to extend -value analysis to secondary structure interactions

24 March 2017

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Solution structure of a Nedd4 WW domain-ENaC peptide complex

24 March 2017

1 reference

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Structural characterization of a mutant peptide derived from ubiquitin: Implications for protein folding

24 March 2017

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Structural basis for phosphoserine-proline recognition by group IV WW domains

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Structure of a WW domain containing fragment of dystrophin in complex with beta-dystroglycan

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Structural analysis of WW domains and design of a WW prototype

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Obligatory steps in protein folding and the conformational diversity of the transition state

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Structural and functional analysis of the mitotic rotamase Pin1 suggests substrate recognition is phosphorylation dependent

24 March 2017

1 reference

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

24 March 2017

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24 March 2017

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Improved methods for building protein models in electron density maps and the location of errors in these models

22 April 2017

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Evolutionary information for specifying a protein fold

24 March 2017

1 reference

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Computer-based redesign of a protein folding pathway

24 March 2017

1 reference

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Beta-bulges within loops as recurring features of protein structure

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Conformation of beta-hairpins in protein structures. A systematic classification with applications to modelling by homology, electron density fitting and protein engineering

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Assessment of phase accuracy by cross validation: the free R value. Methods and applications

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Natural-like function in artificial WW domains

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

A structural perspective of CTD function

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Context-dependent contributions of backbone hydrogen bonding to beta-sheet folding energetics

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Integrating folding kinetics and protein function: biphasic kinetics and dual binding specificity in a WW domain

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Tuning the free-energy landscape of a WW domain by temperature, mutation, and truncation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

WW domain sequence activity relationships identified using ligand recognition propensities of 42 WW domains

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

NeW wrinkles for an old domain

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Mapping the transition state of the WW domain beta-sheet.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

WW: An isolated three-stranded antiparallel beta-sheet domain that unfolds and refolds reversibly; evidence for a structured hydrophobic cluster in urea and GdnHCl and a disordered thermal unfolded state

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Important role of hydrogen bonds in the structurally polarized transition state for folding of the src SH3 domain

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Characterization of the structure and function of W --> F WW domain variants: identification of a natively unfolded protein that folds upon ligand binding

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Role of beta-turn residues in beta-hairpin formation and stability in designed peptides.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

Peptide binding induces large scale changes in inter-domain mobility in human Pin1.

30 May 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600511103

Structure and function of the WW domain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600511103

Accommodating sequence changes in beta-hairpins in proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600511103

Beta-hairpin and beta-sheet formation in designed linear peptides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600511103

Structural basis for APPTPPPLPP peptide recognition by the FBP11WW1 domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600511103

Incorporating beta-turns and a turn mimetic out of context in loop 1 of the WW domain affords cooperatively folded beta-sheets

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600511103

Conformation of β-hairpins in protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600511103

Folding of a β-hairpin peptide derived from the N-terminus of ubiquitin

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600511103

Engineering a beta-sheet protein toward the folding speed limit.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1502286

The folding mechanism of a beta-sheet: the WW domain

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16807295

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Processing of X-ray diffraction data collected in oscillation mode

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16807295