Distributions of Z-DNA and nuclear factor I in human chromosome 22: a model for coupled transcriptional regulation (Q24557483)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15598822%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

title

Distributions of Z-DNA and nuclear factor I in human chromosome 22: a model for coupled transcriptional regulation (English)

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6 January 2020

5

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6 January 2020

author name string

P Christoph Champ

1

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6 January 2020

Sandor Maurice

2

1 reference

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6 January 2020

Jeffrey M Vargason

3

1 reference

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6 January 2020

Tracy Camp

4

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6 January 2020

language of work or name

English

0 references

publication date

14 December 2004

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6 January 2020

published in

Nucleic Acids Research

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6 January 2020

volume

32

1 reference

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6 January 2020

issue

22

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6 January 2020

page(s)

6501-6510

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Z-DNA-binding proteins can act as potent effectors of gene expression in vivo

6 January 2020

cites work

1 reference

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Initial sequencing and analysis of the human genome

24 March 2017

1 reference

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The Zalpha domain from human ADAR1 binds to the Z-DNA conformer of many different sequences

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

A computer aided thermodynamic approach for predicting the formation of Z-DNA in naturally occurring sequences

24 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

24 March 2017

https://api.crossref.org/works/10.1093%2FNAR%2FGKH988

7 January 2021

inferred from DOI database lookup

The Sequence of the Human Genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Crystal structure of the Zalpha domain of the human editing enzyme ADAR1 bound to left-handed Z-DNA

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Molecular structure of a left-handed double helical DNA fragment at atomic resolution

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

The complete genome sequence of Escherichia coli K-12

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

The zab domain of the human RNA editing enzyme ADAR1 recognizes Z-DNA when surrounded by B-DNA

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Supercoiling of the DNA template during transcription

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Transcriptional regulation of mouse MARCKS promoter in immortalized hippocampal cells

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Regulation of CSF1 promoter by the SWI/SNF-like BAF complex

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Experimental analysis and computer prediction of CTF/NFI transcription factor DNA binding sites.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Left-handed Z-DNA: structure and function

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Left-handed Z-DNA and in vivo supercoil density in the Escherichia coli chromosome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Effect of the B--Z transition in poly(dG-m5dC) . poly(dG-m5dC) on nucleosome formation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Supercoiled induced transition to the Z-DNA conformation affects the ability of a d(CG/GC)12 sequence to be organized into nucleosome-cores

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

A reexamination of the reported B----Z DNA transition in nucleosomes reconstituted with poly(dG-m5dC).poly(dG-m5dC).

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Inhibition of DNA supercoiling-dependent transcriptional activation by a distant B-DNA to Z-DNA transition

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Z-DNA: still searching for a function.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Stabilization of Z DNA in vivo by localized supercoiling.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Mapping Z-DNA in the human genome. Computer-aided mapping reveals a nonrandom distribution of potential Z-DNA-forming sequences in human genes.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545456

Activation and repression of transcription initiation by a distant DNA structural transition

30 May 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKH988

Stochastic distribution of a short region of Z-DNA within a long repeated sequence in negatively supercoiled plasmids

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15598822

12 December 2020

inferred from PubMed ID database lookup

Double-stranded RNA adenosine deaminase binds Z-DNA in vitro

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15598822

12 December 2020

inferred from PubMed ID database lookup

Effect of Z-DNA on nucleosome placement

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15598822

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/NAR/GKH988

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15598822%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15598822%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

PubMed publication ID

15598822

1 reference