MetaboAnalyst 2.0--a comprehensive server for metabolomic data analysis (Q24632755)

4

0 references

David Wishart

object named as

David S Wishart

5

0 references

Rupasri Mandal

2

object named as

Rupasri Mandal

0 references

author name string

Igor V Sinelnikov

Creative Commons Attribution-NonCommercial 3.0 Unported

3

0 references

language of work or name

English

0 references

publication date

July 2012

0 references

published in

Nucleic Acids Research

0 references

volume

40

0 references

page(s)

W127-33

0 references

issue

Web Server issue

0 references

copyright license

start time

5 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

MSEA: a web-based tool to identify biologically meaningful patterns in quantitative metabolomic data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

SMPDB: The Small Molecule Pathway Database

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

MetaboAnalyst: a web server for metabolomic data analysis and interpretation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

HMDB: a knowledgebase for the human metabolome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Significance analysis of microarrays applied to the ionizing radiation response

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

MeRy-B: a web knowledgebase for the storage, visualization, analysis and annotation of plant NMR metabolomic profiles

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

metaP-server: a web-based metabolomics data analysis tool

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Targeted metabolomics for biomarker discovery.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

MetPA: a web-based metabolomics tool for pathway analysis and visualization

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

The MetabolomeExpress Project: enabling web-based processing, analysis and transparent dissemination of GC/MS metabolomics datasets

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Independent filtering increases detection power for high-throughput experiments

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Analyzing longitudinal microbial metabolomics data

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Filtering for increased power for microarray data analysis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

MeltDB: a software platform for the analysis and integration of metabolomics experiment data

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

On gene ranking using replicated microarray time course data

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Targeted profiling: quantitative analysis of 1H NMR metabolomics data

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Centering, scaling, and transformations: improving the biological information content of metabolomics data

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Large-scale human metabolomics studies: a strategy for data (pre-) processing and validation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

ANOVA-simultaneous component analysis (ASCA): a new tool for analyzing designed metabolomics data

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

A global test for groups of genes: testing association with a clinical outcome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

GEPAS: A web-based resource for microarray gene expression data analysis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

MetATT: a web-based metabolomics tool for analyzing time-series and two-factor datasets.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Towards quantitative metabolomics of mammalian cells: development of a metabolite extraction protocol

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

High-throughput quantitative metabolomics: workflow for cultivation, quenching, and analysis of yeast in a multiwell format

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Using ANOVA for gene selection from microarray studies of the nervous system

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394314

Probabilistic quotient normalization as robust method to account for dilution of complex biological mixtures. Application in 1H NMR metabonomics

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22553367

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Automics: an integrated platform for NMR-based metabonomics spectral processing and data analysis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22553367

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Metabolomic data processing, analysis, and interpretation using MetaboAnalyst

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKS374

inferred from DOI database lookup

7 January 2021

based on heuristic

Assessment of PLSDA cross validation

1 reference

25 December 2022

https://opencitations.net/index/coci/api/v1/references/10.1093/NAR/GKS374

Application of a priori established gene sets to discover biologically important differential expression in microarray data

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1093/NAR/GKS374

Identifiers

DOI

10.1093/NAR/GKS374

1 reference

146255

DBLP publication ID

journals/nar/XiaMSBW12

1 reference

DBLP Dataset 2021-01-02

28 January 2021

146255

1 reference

1 reference

1 reference