Metabolomic data processing, analysis, and interpretation using MetaboAnalyst (Q33919902)

30 July 2017

Metabolomic data processing, analysis, and interpretation using MetaboAnalyst (English)

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30 July 2017

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Jianguo Xia

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David Wishart

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David S Wishart

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1 June 2011

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Current Protocols in Bioinformatics

30 July 2017

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30 July 2017

Chapter 14

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30 July 2017

Unit 14.10

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Large-scale human metabolomics studies: a strategy for data (pre-) processing and validation

30 July 2017

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https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Evaluation of peak picking quality in LC-MS metabolomics data

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Scaling and normalization effects in NMR spectroscopic metabonomic data sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

A systems biology approach for pathway level analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Cluster analysis and display of genome-wide expression patterns

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Metabolomics – the link between genotypes and phenotypes

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

SMPDB: The Small Molecule Pathway Database

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Bioconductor: open software development for computational biology and bioinformatics

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

A global test for groups of genes: testing association with a clinical outcome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

PathExpress: a web-based tool to identify relevant pathways in gene expression data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Filtering for increased power for microarray data analysis

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

How to distinguish healthy from diseased? Classification strategy for mass spectrometry-based clinical proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

GlobalANCOVA: exploration and assessment of gene group effects.

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

KEGG for linking genomes to life and the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

MZmine: toolbox for processing and visualization of mass spectrometry based molecular profile data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

MetAlign: interface-driven, versatile metabolomics tool for hyphenated full-scan mass spectrometry data preprocessing

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

MeltDB: a software platform for the analysis and integration of metabolomics experiment data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Analysis of strain and regional variation in gene expression in mouse brain

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

pcaMethods--a bioconductor package providing PCA methods for incomplete data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

OpenMS - an open-source software framework for mass spectrometry

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Significance analysis of microarrays applied to the ionizing radiation response

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Centering, scaling, and transformations: improving the biological information content of metabolomics data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

HMDB: the Human Metabolome Database

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

HMDB: a knowledgebase for the human metabolome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

MSEA: a web-based tool to identify biologically meaningful patterns in quantitative metabolomic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

MetPA: a web-based metabolomics tool for pathway analysis and visualization

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

MetaboAnalyst: a web server for metabolomic data analysis and interpretation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Evaluation of Tubulointerstitial Lesions' Severity in Patients with Glomerulonephritides: An NMR-Based Metabonomic Study

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Quantitative metabolomics using NMR

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

Empirical Bayes Analysis of a Microarray Experiment

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1410S34

21 January 2018

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/0471250953.BI1410S34

Assessment of PLSDA cross validation

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/0471250953.BI1410S34

Probabilistic quotient normalization as robust method to account for dilution of complex biological mixtures. Application in 1H NMR metabonomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/0471250953.BI1410S34

Identifiers

DOI

10.1002/0471250953.BI1410S34

1 reference

30 July 2017

1 reference

PubMed ID

21633943