Analysis of the VSG gene silent archive in Trypanosoma brucei reveals that mosaic gene expression is prominent in antigenic variation and is favored by archive substructure (Q24676882)

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English	Analysis of the VSG gene silent archive in Trypanosoma brucei reveals that mosaic gene expression is prominent in antigenic variation and is favored by archive substructure	scientific article

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Analysis of the VSG gene silent archive in Trypanosoma brucei reveals that mosaic gene expression is prominent in antigenic variation and is favored by archive substructure (English)

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Trypanosoma brucei

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author name string

Lucio Marcello

1

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J David Barry

2

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language of work or name

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publication date

September 2007

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Genome Research

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17

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1344-52

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9

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Parasite-intrinsic factors can explain ordered progression of trypanosome antigenic variation

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7 April 2017

Highly variable rates of genome rearrangements between hemiascomycetous yeast lineages

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7 April 2017

Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia

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7 April 2017

The Genome of the African Trypanosome Trypanosoma brucei

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7 April 2017

A structural motif in the variant surface glycoproteins of Trypanosoma brucei

1 reference

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7 April 2017

Regulation of antigen gene expression in Trypanosoma brucei

1 reference

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7 April 2017

The altered evolutionary trajectories of gene duplicates

1 reference

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7 April 2017

Human subtelomeres are hot spots of interchromosomal recombination and segmental duplication

1 reference

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7 April 2017

Mobile elements: drivers of genome evolution

1 reference

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7 April 2017

From silent genes to noisy populations-dialogue between the genotype and phenotypes of antigenic variation

1 reference

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28 September 2017

Switching trypanosome coats: what's in the wardrobe?

1 reference

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28 September 2017

Hemizygous subtelomeres of an African trypanosome chromosome may account for over 75% of chromosome length

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Stability of large segmental duplications in the yeast genome

1 reference

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28 September 2017

What the genome sequence is revealing about trypanosome antigenic variation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Probabilistic order in antigenic variation of Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Isolation of the repertoire of VSG expression site containing telomeres of Trypanosoma brucei 427 using transformation-associated recombination in yeast

1 reference

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28 September 2017

Eucaryotic genome evolution through the spontaneous duplication of large chromosomal segments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Antigenic variation and the African trypanosome genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Why are parasite contingency genes often associated with telomeres?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Antigenic variation in trypanosomes: enhanced phenotypic variation in a eukaryotic parasite

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Predominance of duplicative VSG gene conversion in antigenic variation in African trypanosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Determination of the disulfide bonds within a B domain variant surface glycoprotein from Trypanosoma congolense

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Characterization of the ligand-binding site of the transferrin receptor in Trypanosoma brucei demonstrates a structural relationship with the N-terminal domain of the variant surface glycoprotein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Gene conversions mediating antigenic variation in Trypanosoma brucei can occur in variant surface glycoprotein expression sites lacking 70-base-pair repeat sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

(TAA)n within sequences flanking several intrachromosomal variant surface glycoprotein genes in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Pseudogenes, chimaeric genes and the timing of antigen variation in African trypanosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Antigenic variation in Trypanosoma equiperdum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Comparisons of variable antigenic types produced by trypanosome strains of the subgenus Trypanozoon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Trypanosoma equiperdum: antigenic variations in experimental trypanosomiasis of rabbits

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

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Cultivation and in vitro cloning or procyclic culture forms of Trypanosoma brucei in a semi-defined medium. Short communication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Implications of conserved structural motifs in disparate trypanosome surface proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 September 2017

Rapid evolution of genes coding for variant surface glycoproteins in trypanosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

30 May 2018

Trypanosoma brucei: the extent of conversion in antigen genes may be related to the DNA coding specificity.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

30 May 2018

Trypanosome variable surface glycoproteins: composite genes and order of expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

30 May 2018

Variant specific glycoprotein of Trypanosoma brucei consists of two domains each having an independently conserved pattern of cysteine residues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

30 May 2018

Surface epitope variation via mosaic gene formation is potential key to long-term survival of Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

30 May 2018

Structure ofKluyveromyces lactissubtelomeres: duplications and gene content

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

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Structural basis for segmental gene conversion in generation of Anaplasma marginale outer membrane protein variants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 November 2018

Structure of the C-terminal domain from Trypanosoma brucei variant surface glycoprotein MITat1.2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 November 2018

The importance of mosaic genes to trypanosome survival

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 November 2018

VSG structure: similar N-terminal domains can form functional VSGs with different types of C-terminal domain.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 November 2018

The origin of the serum resistance associated (SRA) gene and a model of the structure of the SRA polypeptide from Trypanosoma brucei rhodesiense.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 November 2018

Use of chimeric recombinant polypeptides to analyse conformational, surface epitopes on trypanosome variant surface glycoproteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 November 2018

Activation of the genes for variant surface glycoproteins 117 and 118 in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 November 2018

Trypanosome variant surface glycoprotein genes expressed early in infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 November 2018

Rapid change of the repertoire of variant surface glycoprotein genes in trypanosomes by gene duplication and deletion.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950903

28 November 2018

Visualizing large hierarchical clusters in hyperbolic space

1 reference

https://pubmed.ncbi.nlm.nih.gov/17652423

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genomic environment of T. brucei VSG genes: presence of a minichromosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/17652423

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The molecular karyotype of the megabase chromosomes of Trypanosoma brucei and the assignment of chromosome markers

1 reference

https://pubmed.ncbi.nlm.nih.gov/17652423

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Topological analysis of antigenic determinants on a variant surface glycoprotein of Trypanosoma brucei

1 reference

https://pubmed.ncbi.nlm.nih.gov/17652423

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1101/GR.6421207

1 reference

Consolidated OpenCitations Corpus – April 2017

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OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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