Global nucleosome occupancy in yeast (Q24801575)

5

object named as

Stuart L Schreiber

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author name string

Chih Long Liu

2

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Emily L Humphrey

3

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Ethan O Perlstein

https://scigraph.springernature.com/pub.10.1186/gb-2004-5-9-r62

4

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language of work or name

English

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publication date

2004

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published in

Genome Biology

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volume

5

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issue

9

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page(s)

R62

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exact match

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cites work

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7 April 2017

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Two DNA-binding factors recognize specific sequences at silencers, upstream activating sequences, autonomously replicating sequences, and telomeres in Saccharomyces cerevisiae

7 April 2017

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7 April 2017

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7 April 2017

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Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity

7 April 2017

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Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF

7 April 2017

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Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II

7 April 2017

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Methylation of histone H3 Lys 4 in coding regions of active genes

7 April 2017

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7 April 2017

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Cooperation between complexes that regulate chromatin structure and transcription

7 April 2017

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Histone methylation in transcriptional control

7 April 2017

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Rad6-dependent ubiquitination of histone H2B in yeast

7 April 2017

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Rapamycin-modulated transcription defines the subset of nutrient-sensitive signaling pathways directly controlled by the Tor proteins

7 April 2017

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Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome

7 April 2017

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Transcriptional silencing in yeast is associated with reduced nucleosome acetylation

7 April 2017

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7 April 2017

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Identifying cooperativity among transcription factors controlling the cell cycle in yeast

28 September 2017

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Getting into chromatin: how do transcription factors get past the histones?

28 September 2017

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Transcriptional elongation by RNA polymerase II and histone methylation

28 September 2017

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Tails of intrigue: phosphorylation of RNA polymerase II mediates histone methylation

28 September 2017

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Genomewide demarcation of RNA polymerase II transcription units revealed by physical fractionation of chromatin

28 September 2017

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Histone acetylation and deacetylation in yeast

28 September 2017

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Phosphorylation of RNA polymerase II CTD regulates H3 methylation in yeast

28 September 2017

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Collaborative competition mechanism for gene activation in vivo

28 September 2017

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28 September 2017

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The Set2 histone methyltransferase functions through the phosphorylated carboxyl-terminal domain of RNA polymerase II.

28 September 2017

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The tor pathway regulates gene expression by linking nutrient sensing to histone acetylation

28 September 2017

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Association of the histone methyltransferase Set2 with RNA polymerase II plays a role in transcription elongation

28 September 2017

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Braking the silence: how heterochromatic gene repression is stopped in its tracks.

28 September 2017

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Heterochromatin: new possibilities for the inheritance of structure

28 September 2017

1 reference

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Chemical inhibition of the Pho85 cyclin-dependent kinase reveals a role in the environmental stress response

28 September 2017

1 reference

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Promoter targeting of chromatin-modifying complexes.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

Poly(dA-dT) promoter elements increase the equilibrium accessibility of nucleosomal DNA target sites

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

Coordinate regulation of yeast ribosomal protein genes is associated with targeted recruitment of Esa1 histone acetylase

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

In vivo cross-linking and immunoprecipitation for studying dynamic Protein:DNA associations in a chromatin environment

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

Chromatin opening and transactivator potentiation by RAP1 in Saccharomyces cerevisiae

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

UASrpg can function as a heterochromatin boundary element in yeast

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

Use of a selection technique to identify the diversity of binding sites for the yeast RAP1 transcription factor

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

Binding of disparate transcriptional activators to nucleosomal DNA is inherently cooperative

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

Chromatin and transcription--how transcription factors battle with a repressive chromatin environment

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

Nucleosome loss activates yeast downstream promoters in vivo

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

Nucleosomes unfold completely at a transcriptionally active promoter.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

Regulation of subtelomeric silencing during stress response.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522869

Mapping chromatin structure in yeast

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15345046

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Partitioning the transcriptional program induced by rapamycin among the effectors of the Tor proteins

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15345046

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Evidence for two modes of cooperative DNA binding in vivo that do not involve direct protein-protein interactions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15345046

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GB-2004-5-9-R62

1 reference

Dimensions Publication ID

4020956

1052780836

0 references

4020956

1 reference

1 reference

1 reference