Signal sequence analysis of expressed sequence tags from the nematode Nippostrongylus brasiliensis and the evolution of secreted proteins in parasites (Q24804801)

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English	Signal sequence analysis of expressed sequence tags from the nematode Nippostrongylus brasiliensis and the evolution of secreted proteins in parasites	scientific article

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scholarly article

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Signal sequence analysis of expressed sequence tags from the nematode Nippostrongylus brasiliensis and the evolution of secreted proteins in parasites (English)

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protein evolution

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Nippostrongylus brasiliensis

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Nippostrongylus brasiliensis

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based on heuristic

inferred from title

4

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Murray E Selkirk

object named as

Murray E Selkirk

5

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object named as

Mark L Blaxter

6

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Richard M. Maizels

7

object named as

Rick M Maizels

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author name string

Yvonne M Harcus

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John Parkinson

2

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Cecilia Fernández

3

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language of work or name

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publication date

2004

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5

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R39

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6

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https://scigraph.springernature.com/pub.10.1186/gb-2004-5-6-r39

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The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics

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7 April 2017

Analysis and functional classification of transcripts from the nematode Meloidogyne incognita

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

7 April 2017

Making sense of EST sequences by CLOBBing them

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

7 April 2017

Genome sequence of the nematode C. elegans: a platform for investigating biology

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

7 April 2017

Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

7 April 2017

A new method for predicting signal sequence cleavage sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

7 April 2017

Immune regulation by helminth parasites: cellular and molecular mechanisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

7 April 2017

The filarial genome project: analysis of the nuclear, mitochondrial and endosymbiont genomes of Brugia malayi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

7 April 2017

ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

7 April 2017

A molecular evolutionary framework for the phylum Nematoda

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

7 April 2017

Genes and genomes of parasitic nematodes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

400000 nematode ESTs on the Net.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

SimiTri--visualizing similarity relationships for groups of sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Comprehensive analysis of the secreted proteins of the parasite Haemonchus contortus reveals extensive sequence variation and differential immune recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Prediction of protein signal sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Full-length-enriched cDNA libraries from Echinococcus granulosus contain separate populations of oligo-capped and trans-spliced transcripts and a high level of predicted signal peptide sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

The Brugia malayi genome project: expressed sequence tags and gene discovery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Immunology of parasitic helminth infections

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Cloning and characterization of a novel gene encoding keratin-like protein from nematode Nippostrongylus brasiliensis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Structural analysis and antibody response to the extracellular glutathione S-transferases from Onchocerca volvulus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Nippocystatin, a cysteine protease inhibitor from Nippostrongylus brasiliensis, inhibits antigen processing and modulates antigen-specific immune response

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Comparing function and structure between entire proteomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Immune evasion genes from filarial nematodes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Serine proteinase inhibitors from nematodes and the arms race between host and pathogen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

A comparison of signal sequence prediction methods using a test set of signal peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

EST sequencing of the parasitic nematode Haemonchus contortus suggests a shift in gene expression during transition to the parasitic stages.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Analysis of genes expressed at the infective larval stage validates utility of Litomosoides sigmodontis as a murine model for filarial vaccine development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Helminth C-type lectins and host-parasite interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Identification of potential vaccine and drug target candidates by expressed sequence tag analysis and immunoscreening of Onchocerca volvulus larval cDNA libraries

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

A survey of genes expressed in adults of the human hookworm, Necator americanus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Identification of abundantly expressed novel and conserved genes from the infective larval stage of Toxocara canis by an expressed sequence tag strategy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Proteinases and associated genes of parasitic helminths

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Machine learning approaches for the prediction of signal peptides and other protein sorting signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Filarial nematode parasites secrete a homologue of the human cytokine macrophage migration inhibitory factor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Cytokine regulation of host defense against parasitic gastrointestinal nematodes: lessons from studies with rodent models.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Cloning and characterization of Ancylostoma-secreted protein. A novel protein associated with the transition to parasitism by infective hookworm larvae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Immunological modulation and evasion by helminth parasites in human populations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Trans-splicing of nematode premessenger RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Excretory-secretory products of helminth parasites: effects on host immune responses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

The importance of Th2 cytokines in protective immunity to nematodes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Nematode spliced leaders--ubiquity, evolution and utility

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 September 2017

Characterization of a platelet-activating factor acetylhydrolase secreted by the nematode parasite Nippostrongylus brasiliensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

30 May 2018

Acetylcholinesterase secretion by parasitic nematodes. I. Evidence for secretion of the enzyme by a number of species.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

30 May 2018

Characterisation of the secretory acetylcholinesterases from adult Nippostrongylus brasiliensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

30 May 2018

Nemoglobins: divergent nematode globins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 November 2018

A distinct family of acetylcholinesterases is secreted by Nippostrongylus brasiliensis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 November 2018

Homologues of human macrophage migration inhibitory factor from a parasitic nematode. Gene cloning, protein activity, and crystal structure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 November 2018

Amino acid translation program for full-length cDNA sequences with frameshift errors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 November 2018

Proteins secreted by the parasitic nematode Nippostrongylus brasiliensis act as adjuvants for Th2 responses.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 November 2018

Cloning, expression, and properties of a nonneuronal secreted acetylcholinesterase from the parasitic nematode Nippostrongylus brasiliensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 November 2018

The expression of a small heat shock protein homologue is developmentally regulated in Nippostrongylus brasiliensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 November 2018

Sequence, expression and evolution of the globins of the parasitic nematode Nippostrongylus brasiliensis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 November 2018

Restricted sets of parasite antigens from the surface of different stages and sexes of the nematode parasite Nippostrongylus brasiliensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=463072

28 November 2018

Purification and properties of monomeric (G1) forms of acetylcholinesterase secreted by Nippostrongylus brasiliensis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15186490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of proteolytic enzymes from larval and adultNippostrongylus brasiliensis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15186490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Many random sequences functionally replace the secretion signal sequence of yeast invertase

1 reference

https://pubmed.ncbi.nlm.nih.gov/15186490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Parasite immunity: Pathways for expelling intestinal helminths

1 reference

https://pubmed.ncbi.nlm.nih.gov/15186490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inactivation of platelet-activating factor by a putative acetylhydrolase from the gastrointestinal nematode parasite Nippostrongylus brasiliensis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15186490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nippostrongylus brasiliensis: characterisation of a somatic amphiphilic acetylcholinesterase with properties distinct from the secreted enzymes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15186490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Suppression of secreted acetylcholinesterase expression in Nippostrongylus brasiliensis by RNA interference

1 reference

https://pubmed.ncbi.nlm.nih.gov/15186490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cysteine protease of the nematode Nippostrongylus brasiliensis preferentially evokes an IgE/IgG1 antibody response in rats

1 reference

https://pubmed.ncbi.nlm.nih.gov/15186490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of the properties of tubulin from Nippostrongylus brasiliensis with mammalian brain tubulin

1 reference

https://pubmed.ncbi.nlm.nih.gov/15186490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/GB-2004-5-6-R39

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