Examination of an inverted repeat within the F factor origin of transfer: context dependence of F TraI relaxase DNA specificity (Q25255767)

6 July 2017

title

Examination of an inverted repeat within the F factor origin of transfer: context dependence of F TraI relaxase DNA specificity (English)

1 reference

6 July 2017

Sarah L Williams

1

1 reference

6 July 2017

Joel F Schildbach

series ordinal

2

1 reference

6 July 2017

language of work or name

English

0 references

publication date

17 January 2006

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6 July 2017

published in

Nucleic Acids Research

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6 July 2017

volume

34

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6 July 2017

issue

2

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6 July 2017

page(s)

426-435

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Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes and archaebacteria

6 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

The nuclease domain of adeno-associated virus rep coordinates replication initiation using two distinct DNA recognition interfaces

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Site-specific recombinase and integrase activities of a conjugative relaxase in recipient cells

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Inter- and intramolecular determinants of the specificity of single-stranded DNA binding and cleavage by the F factor relaxase.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Energetics of the sequence-specific binding of single-stranded DNA by the F factor relaxase domain

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Multiple substrates of the Legionella pneumophila Dot/Icm system identified by interbacterial protein transfer.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

DNA recognition by F factor TraI36: highly sequence-specific binding of single-stranded DNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Two active-site tyrosyl residues of protein TrwC act sequentially at the origin of transfer during plasmid R388 conjugation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Characterization of the reaction product of the oriT nicking reaction catalyzed by Escherichia coli DNA helicase I.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Relaxase (TraI) of IncP alpha plasmid RP4 catalyzes a site-specific cleaving-joining reaction of single-stranded DNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Analysis of the sequence and gene products of the transfer region of the F sex factor

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Analysis of equilibrium binding data obtained by linear-response spectroscopic techniques

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

In vitro assembly of relaxosomes at the transfer origin of plasmid RP4.

28 September 2017

1 reference

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Endonuclease activity of Escherichia coli DNA helicase I directed against the transfer origin of the F factor.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Initiation and termination of DNA transfer at F plasmid oriT.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

The F plasmid origin of transfer: DNA sequence of wild-type and mutant origins and location of origin-specific nicks

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Covalent association of the traI gene product of plasmid RP4 with the 5'-terminal nucleotide at the relaxation nick site.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Escherichia coli DNA helicase I catalyzes a site- and strand-specific nicking reaction at the F plasmid oriT

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1331984

Subdomain organization and catalytic residues of the F factor TraI relaxase domain

31 May 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16418503

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Computer-assisted dissection of rolling circle DNA replication

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16418503

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Boundaries of the nicking region for the F plasmid transfer origin, oriT

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16418503

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKJ444

1 reference

OpenCitations bibliographic resource ID

6 July 2017

1890140

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

6 July 2017

1 reference