What can we learn from fitness landscapes? (Q26830367)

Crossref

language of work or name

1 reference

October 2014

1 reference

Current Opinion in Microbiology

published in

1 reference

volume

21

1 reference

page(s)

51-7

1 reference

Quantitative exploration of the catalytic landscape separating divergent plant sesquiterpene synthases

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7 April 2017

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Fitness trade-offs in the evolution of dihydrofolate reductase and drug resistance in Plasmodium falciparum

7 April 2017

1 reference

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Evolutionary trajectories of beta-lactamase CTX-M-1 cluster enzymes: predicting antibiotic resistance

7 April 2017

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Darwinian evolution can follow only very few mutational paths to fitter proteins

7 April 2017

1 reference

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Microbial evolution. Global epistasis makes adaptation predictable despite sequence-level stochasticity

7 April 2017

1 reference

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Harnessing evolutionary fitness in Plasmodium falciparum for drug discovery and suppressing resistance

28 September 2017

1 reference

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Should evolutionary geneticists worry about higher-order epistasis?

28 September 2017

1 reference

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Environment determines epistatic patterns for a ssDNA virus

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Designing antibiotic cycling strategies by determining and understanding local adaptive landscapes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Evolutionary accessibility of mutational pathways

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

The evolutionary landscape of antifolate resistance in Plasmodium falciparum

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Diminishing returns epistasis among beneficial mutations decelerates adaptation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

A biophysical protein folding model accounts for most mutational fitness effects in viruses

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Reciprocal sign epistasis between frequently experimentally evolved adaptive mutations causes a rugged fitness landscape

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Compensatory mutations restore fitness during the evolution of dihydrofolate reductase

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Natural evolution of TEM-1 β-lactamase: experimental reconstruction and clinical relevance

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Fitness epistasis and constraints on adaptation in a human immunodeficiency virus type 1 protein region

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Colloquium papers: Adaptive landscapes and protein evolution

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Stepwise acquisition of pyrimethamine resistance in the malaria parasite

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Analysis of epistatic interactions and fitness landscapes using a new geometric approach

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Empirical fitness landscapes reveal accessible evolutionary paths

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Direct demonstration of an adaptive constraint

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Evolution of hormone-receptor complexity by molecular exploitation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

The biochemical architecture of an ancient adaptive landscape

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Missense meanderings in sequence space: a biophysical view of protein evolution

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Perspective: Sign epistasis and genetic constraint on evolutionary trajectories

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Factors affecting the genetic load in Drosophila: synergistic epistasis and correlations among fitness components

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Limits of adaptation: the evolution of selective neutrality

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Patterns of Epistasis between beneficial mutations in an antibiotic resistance gene

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

The peaks and geometry of fitness landscapes

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Magnitude and sign epistasis among deleterious mutations in a positive-sense plant RNA virus

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Ancestral lysozymes reconstructed, neutrality tested, and thermostability linked to hydrocarbon packing.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Accessible mutational trajectories for the evolution of pyrimethamine resistance in the malaria parasite Plasmodium vivax

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Evolution-based design of proteins.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Epistasis from functional dependence of fitness on underlying traits.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Hidden randomness between fitness landscapes limits reverse evolution.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Negative epistasis between beneficial mutations in an evolving bacterial population

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Genome structure and the benefit of sex.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Exploring the effect of sex on empirical fitness landscapes

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

A cross-section of the fitness landscape of dihydrofolate reductase

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Predicting epistasis from mathematical models.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4254422

Mutational reversions during adaptive protein evolution

28 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/25444121

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Fitness epistasis among 6 biosynthetic loci in the budding yeast Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/25444121