Molecular mechanisms of template-independent RNA polymerization by tRNA nucleotidyltransferases (Q26849686)

title

Molecular mechanisms of template-independent RNA polymerization by tRNA nucleotidyltransferases (English)

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24596576%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

author name string

Seisuke Yamashita

series ordinal

2

2 references

Crossref

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24596576%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

language of work or name

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2014

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published in

Frontiers in Genetics

2 references

Crossref

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24596576%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

volume

5

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24596576%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

page(s)

36

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24596576%20AND%20SRC:MED&resulttype=core&format=json

RNA-specific ribonucleotidyl transferases

8 June 2020

cites work

1 reference

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Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase

7 April 2017

1 reference

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Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases

7 April 2017

1 reference

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How the CCA-Adding Enzyme Selects Adenine over Cytosine at Position 76 of tRNA

7 April 2017

1 reference

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Mechanism for the definition of elongation and termination by the class II CCA-adding enzyme

7 April 2017

1 reference

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Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme

7 April 2017

1 reference

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Crystal structures of an archaeal class I CCA-adding enzyme and its nucleotide complexes

7 April 2017

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Divergent evolutions of trinucleotide polymerization revealed by an archaeal CCA-adding enzyme structure

7 April 2017

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Crystal structure of the human CCA-adding enzyme: insights into template-independent polymerization

7 April 2017

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Crystal structures of the Bacillus stearothermophilus CCA-adding enzyme and its complexes with ATP or CTP

7 April 2017

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Structure of yeast poly(A) polymerase alone and in complex with 3'-dATP

7 April 2017

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Crystal structure of mammalian poly(A) polymerase in complex with an analog of ATP

7 April 2017

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The structural basis of ribosome activity in peptide bond synthesis

7 April 2017

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A top-half tDNA minihelix is a good substrate for the eubacterial CCA-adding enzyme.

7 April 2017

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Molecular structure of kanamycin nucleotidyltransferase determined to 3.0-A resolution

7 April 2017

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Crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism

7 April 2017

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tRNA Maturation: RNA Polymerization without a Nucleic Acid Template

7 April 2017

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CCA addition by tRNA nucleotidyltransferase: polymerization without translocation?

7 April 2017

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A molecular view of microbial diversity and the biosphere

7 April 2017

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Unusual synthesis by the Escherichia coli CCA-adding enzyme.

7 April 2017

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An inhibitory C-terminal region dictates the specificity of A-adding enzymes.

7 April 2017

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tRNAs marked with CCACCA are targeted for degradation

28 September 2017

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Evolution of tRNA nucleotidyltransferases: a small deletion generated CC-adding enzymes.

28 September 2017

1 reference

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Reengineering CCA-adding enzymes to function as (U,G)- or dCdCdA-adding enzymes or poly(C,A) and poly(U,G) polymerases

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

A story with a good ending: tRNA 3'-end maturation by CCA-adding enzymes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

A phylogeny of bacterial RNA nucleotidyltransferases: Bacillus halodurans contains two tRNA nucleotidyltransferases

28 September 2017

1 reference

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Mechanism of transfer RNA maturation by CCA-adding enzyme without using an oligonucleotide template

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

Sulfolobus shibatae CCA-adding enzyme forms a tetramer upon binding two tRNA molecules: A scrunching-shuttling model of CCA specificity

28 September 2017

1 reference

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The CCA-adding enzyme has a single active site

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

Mutational analysis of mammalian poly(A) polymerase identifies a region for primer binding and catalytic domain, homologous to the family X polymerases, and to other nucleotidyltransferases

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

Isolation of a temperature-sensitive mutant with an altered tRNA nucleotidyltransferase and cloning of the gene encoding tRNA nucleotidyltransferase in the yeast Saccharomyces cerevisiae.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

The -C-C-A End of tRNA and Its Role in Protein Biosynthesis

28 September 2017

1 reference

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Structural and functional insights provided by crystal structures of DNA polymerases and their substrate complexes.

28 September 2017

1 reference

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Ribosomes and translation

31 May 2018

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CCA-adding enzymes and poly(A) polymerases are all members of the same nucleotidyltransferase superfamily: characterization of the CCA-adding enzyme from the archaeal hyperthermophile Sulfolobus shibatae.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

Transfer RNA nucleotidyltransferase

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

Complete crystallographic analysis of the dynamics of CCA sequence addition.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

A model for C74 addition by CCA-adding enzymes: C74 addition, like C75 and A76 addition, does not involve tRNA translocation

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

Two classes give lessons about CCA.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

Structural basis for template-independent RNA polymerization.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

The structural mechanism of translocation and helicase activity in T7 RNA polymerase

28 November 2018

1 reference

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Collaboration between CC- and A-adding enzymes to build and repair the 3'-terminal CCA of tRNA in Aquifex aeolicus.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

DNA polymerase beta belongs to an ancient nucleotidyltransferase superfamily

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925840

The role of tightly bound ATP in Escherichia coli tRNA nucleotidyltransferase

28 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/24596576

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Base-pairing between 23S rRNA and tRNA in the ribosomal A site

1 reference

https://pubmed.ncbi.nlm.nih.gov/24596576

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

1 reference

https://pubmed.ncbi.nlm.nih.gov/24596576

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.3389/FGENE.2014.00036

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24596576%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24596576%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

PubMed publication ID

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24596576%20AND%20SRC:MED&resulttype=core&format=json