Gene-specific requirement of RNA polymerase II CTD phosphorylation (Q26863342)

Damien Hermand

series ordinal

2

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language of work or name

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June 2012

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published in

Molecular Microbiology

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volume

84

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issue

6

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page(s)

995-1004

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TFIIH kinase places bivalent marks on the carboxy-terminal domain of RNA polymerase II.

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Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae.

21 January 2018

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Phosphorylation of RNAPII: To P-TEFb or not to P-TEFb?

21 January 2018

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CDK12 is a transcription elongation-associated CTD kinase, the metazoan ortholog of yeast Ctk1

21 January 2018

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Rules of engagement: co-transcriptional recruitment of pre-mRNA processing factors

21 January 2018

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Systematic deletion analysis of fission yeast protein kinases.

21 January 2018

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The Cyclin K/Cdk12 complex maintains genomic stability via regulation of expression of DNA damage response genes

21 January 2018

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Modifications of RNA polymerase II are pivotal in regulating gene expression states

21 January 2018

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https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

21 January 2018

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https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Progression through the RNA polymerase II CTD cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Rsp5 WW domains interact directly with the carboxyl-terminal domain of RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

RNA polymerase II carboxy-terminal domain with multiple connections

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

mRNA capping enzyme is recruited to the transcription complex by phosphorylation of the RNA polymerase II carboxy-terminal domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Opposing effects of Ctk1 kinase and Fcp1 phosphatase at Ser 2 of the RNA polymerase II C-terminal domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

A gene-specific requirement of RNA polymerase II CTD phosphorylation for sexual differentiation in S. pombe

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Modulation of RNA polymerase II subunit composition by ubiquitylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Unphosphorylated SR-like protein Npl3 stimulates RNA polymerase II elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Yhh1p/Cft1p directly links poly(A) site recognition and RNA polymerase II transcription termination

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

DSIF and RNA polymerase II CTD phosphorylation coordinate the recruitment of Rpd3S to actively transcribed genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Dynamic transcriptome of Schizosaccharomyces pombe shown by RNA-DNA hybrid mapping

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Serine-7 of the RNA polymerase II CTD is specifically required for snRNA gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Mediator-dependent recruitment of TFIIH modules in preinitiation complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Relationship of CDK-activating kinase and RNA polymerase II CTD kinase TFIIH/TFIIK

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

TFIIH-associated Cdk7 kinase functions in phosphorylation of C-terminal domain Ser7 residues, promoter-proximal pausing, and termination by RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Phosphorylated Pol II CTD recruits multiple HDACs, including Rpd3C(S), for methylation-dependent deacetylation of ORF nucleosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Recruitment of P-TEFb (Cdk9-Pch1) to chromatin by the cap-methyl transferase Pcm1 in fission yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Comparative genomics of cyclin-dependent kinases suggest co-evolution of the RNAP II C-terminal domain and CTD-directed CDKs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

The yeast C-type cyclin Ctk2p is phosphorylated and rapidly degraded by the ubiquitin-proteasome pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Activation of the cyclin-dependent kinase CTDK-I requires the heterodimerization of two unstable subunits

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Distinct roles for CTD Ser-2 and Ser-5 phosphorylation in the recruitment and allosteric activation of mammalian mRNA capping enzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

The C-terminal domain of the largest subunit of RNA polymerase II is required for stationary phase entry and functionally interacts with the Ras/PKA signaling pathway.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Involvement of yeast carboxy-terminal domain kinase I (CTDK-I) in transcription elongation in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Chemical inhibition of the TFIIH-associated kinase Cdk7/Kin28 does not impair global mRNA synthesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

A cyclin-dependent kinase that promotes cytokinesis through modulating phosphorylation of the carboxy terminal domain of the RNA Pol II Rpb1p sub-unit

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Bur1 kinase is required for efficient transcription elongation by RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Gene-specific RNA polymerase II phosphorylation and the CTD code

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Phosphorylation of the yeast Rpb1 C-terminal domain at serines 2, 5, and 7.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 K36 methylation with transcript elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

A zinc-finger protein, Rst2p, regulates transcription of the fission yeast ste11(+) gene, which encodes a pivotal transcription factor for sexual development

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

The role of the yeast cleavage and polyadenylation factor subunit Ydh1p/Cft2p in pre-mRNA 3'-end formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

A protein kinase that phosphorylates the C-terminal repeat domain of the largest subunit of RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Modulation of RNA polymerase II elongation efficiency by C-terminal heptapeptide repeat domain kinase I.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

The Set2 histone methyltransferase functions through the phosphorylated carboxyl-terminal domain of RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Association of the histone methyltransferase Set2 with RNA polymerase II plays a role in transcription elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Functional interaction of yeast pre-mRNA 3' end processing factors with RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Evolution of cyclin-dependent kinases (CDKs) and CDK-activating kinases (CAKs): differential conservation of CAKs in yeast and metazoa

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Genetic organization, length conservation, and evolution of RNA polymerase II carboxyl-terminal domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Two cyclin-dependent kinases promote RNA polymerase II transcription and formation of the scaffold complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Phosphorylation of the transcription elongation factor Spt5 by yeast Bur1 kinase stimulates recruitment of the PAF complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

5'-Capping enzymes are targeted to pre-mRNA by binding to the phosphorylated carboxy-terminal domain of RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

The C-terminal domain of RNA polymerase II couples mRNA processing to transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Cotranscriptional association of mRNA export factor Yra1 with C-terminal domain of RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Hyperphosphorylation of the C-terminal repeat domain of RNA polymerase II facilitates dissociation of its complex with mediator

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Uniform transitions of the general RNA polymerase II transcription complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Recognition of RNA polymerase II carboxy-terminal domain by 3'-RNA-processing factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Fission yeast SWI/SNF and RSC complexes show compositional and functional differences from budding yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

The splicing factor, Prp40, binds the phosphorylated carboxyl-terminal domain of RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Phospho-carboxyl-terminal domain binding and the role of a prolyl isomerase in pre-mRNA 3'-End formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Rtr1 is a CTD phosphatase that regulates RNA polymerase II during the transition from serine 5 to serine 2 phosphorylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Key features of the interaction between Pcf11 CID and RNA polymerase II CTD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Gene loops juxtapose promoters and terminators in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Budding yeast CTDK-I is required for DNA damage-induced transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Investigating RNA polymerase II carboxyl-terminal domain (CTD) phosphorylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Sus1 is recruited to coding regions and functions during transcription elongation in association with SAGA and TREX2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

"Cotranscriptionality": the transcription elongation complex as a nexus for nuclear transactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Phosphorylation and functions of the RNA polymerase II CTD

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Phosphorylation of the Pol II CTD by KIN28 enhances BUR1/BUR2 recruitment and Ser2 CTD phosphorylation near promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Cyclin C/CDK8 and cyclin H/CDK7/p36 are biochemically distinct CTD kinases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Kin28, the TFIIH-associated carboxy-terminal domain kinase, facilitates the recruitment of mRNA processing machinery to RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Global gene expression analysis of fission yeast mutants impaired in Ser-2 phosphorylation of the RNA pol II carboxy terminal domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Dynamic association of capping enzymes with transcribing RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Deciphering the RNA polymerase II CTD code in fission yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Schizosaccharomyces pombe ste11+ encodes a transcription factor with an HMG motif that is a critical regulator of sexual development

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

The fission yeast stress-responsive MAPK pathway promotes meiosis via the phosphorylation of Pol II CTD in response to environmental and feedback cues

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Chemical-genomic dissection of the CTD code.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

The Nrd1–Nab3–Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

TFIIH and P-TEFb coordinate transcription with capping enzyme recruitment at specific genes in fission yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Structure and carboxyl-terminal domain (CTD) binding of the Set2 SRI domain that couples histone H3 Lys36 methylation to transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Evidence that P-TEFb alleviates the negative effect of DSIF on RNA polymerase II-dependent transcription in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Transcription elongation factor hSPT5 stimulates mRNA capping

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Bur1/Bur2 and the Ctk complex in yeast: the split personality of mammalian P-TEFb

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

P-TEFb-mediated phosphorylation of hSpt5 C-terminal repeats is critical for processive transcription elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

The Spt6 SH2 domain binds Ser2-P RNAPII to direct Iws1-dependent mRNA splicing and export

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

Mcs2 and a novel CAK subunit Pmh1 associate with Skp1 in fission yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X

The essential sequence elements required for RNAP II carboxyl-terminal domain function in yeast and their evolutionary conservation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2012.08071.X