DNA structure and function (Q27022863)

Georgi Muskhelishvili

series ordinal

2

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language of work or name

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June 2015

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282

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issue

12

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page(s)

2279-95

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Molecular Structure of Nucleic Acids: A Structure for Deoxyribose Nucleic Acid

cites work

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https://api.crossref.org/works/10.1111%2FFEBS.13307

STUDIES ON THE CHEMICAL NATURE OF THE SUBSTANCE INDUCING TRANSFORMATION OF PNEUMOCOCCAL TYPES: INDUCTION OF TRANSFORMATION BY A DESOXYRIBONUCLEIC ACID FRACTION ISOLATED FROM PNEUMOCOCCUS TYPE III

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Dissecting the logical types of network control in gene expression profiles

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Mapping the phase diagram of the writhe of DNA nanocircles using atomistic molecular dynamics simulations

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Molecular and crystal structures of double-helical RNA. 3. An 11-fold molecular model and comparison of the agreement between the observed and calculated three-dimensional diffraction data for 10- and 11-fold models

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

The anatomy of A-, B-, and Z-DNA.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Historical article: DNA polymorphism and the early history of the double helix

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Molecular Configuration in Sodium Thymonucleate

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Mechanical properties of high-G.C content DNA with a-type base-stacking

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

The influence of DNA stiffness upon nucleosome formation

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Atomic force microscopy study of the structural effects induced by echinomycin binding to DNA.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA sequence-specific reading by echinomycin: role of hydrogen bonding and stacking interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA stem-loop structures in oligopurine-oligopyrimidine triplexes

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Telomeric DNA dimerizes by formation of guanine tetrads between hairpin loops

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Crystal structure of four-stranded Oxytricha telomeric DNA

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Self-assembly of double-stranded DNA molecules at nanomolar concentrations.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA bending at adenine . thymine tracts

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Sequence periodicities in chicken nucleosome core DNA.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA information: from digital code to analogue structure

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Crystal structure of the nucleosome core particle at 2.8 A resolution

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

The bending of DNA in nucleosomes and its wider implications

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA sequence determinants of CAP-induced bending and protein binding affinity.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Sequence specificity of curved DNA.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Evidence for opposite groove-directed curvature of GGGCCC and AAAAA sequence elements

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA sequence-dependent deformability deduced from protein-DNA crystal complexes

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

A bifurcated hydrogen-bonded conformation in the d(A.T) base pairs of the DNA dodecamer d(CGCAAATTTGCG) and its complex with distamycin

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

The structure of an oligo(dA).oligo(dT) tract and its biological implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Crystal lattice packing is important in determining the bend of a DNA dodecamer containing an adenine tract

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Curved DNA: design, synthesis, and circularization

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Determinants of nucleosome positioning

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Stacked-unstacked equilibrium at the nick site of DNA

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

The twisted circular form of polyoma viral DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

The Folded Genome of Escherichia coli Isolated in a Protein-DNA-RNA Complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

On the structure of the folded chromosome of Escherichia coli

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Structure and reactions of closed duplex DNA

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Cellular roles of dna topoisomerases: a molecular perspective

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Supercoiling of the DNA template during transcription

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Transcription generates positively and negatively supercoiled domains in the template.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA gyrase: an enzyme that introduces superhelical turns into DNA

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Direct observation of DNA rotation during transcription by Escherichia coli RNA polymerase

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Formation of supercoiling domains in plasmid pBR322.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Anchoring of DNA to the bacterial cytoplasmic membrane through cotranscriptional synthesis of polypeptides encoding membrane proteins or proteins for export: a mechanism of plasmid hypernegative supercoiling in mutants deficient in DNA topoisomerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Elevated unconstrained supercoiling of plasmid DNA generated by transcription and translation of the tetracycline resistance gene in eubacteria.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Temperature dependence of the DNA double helix at the nanoscale: structure, elasticity, and fluctuations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Regulation of bacterial DNA supercoiling: plasmid linking numbers vary with growth temperature

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA supercoiling depends on the phosphorylation potential in Escherichia coli.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

The effect of bacterial DNA gyrase inhibitors on DNA synthesis in mammalian mitochondria

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Arabidopsis thaliana DNA gyrase is targeted to chloroplasts and mitochondria

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Transcription forms and remodels supercoiling domains unfolding large-scale chromatin structures

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Spiral structure of Escherichia coli HU provides foundation for DNA supercoiling

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Torsion-mediated interaction between adjacent genes

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Composition and functional specificity of SWI2/SNF2 class chromatin remodeling complexes

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Regulating the chromatin landscape: structural and mechanistic perspectives

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

The chromatin-specific transcription elongation factor FACT comprises human SPT16 and SSRP1 proteins

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

A bipartite yeast SSRP1 analog comprised of Pob3 and Nhp6 proteins modulates transcription

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Spt16-Pob3 and the HMG protein Nhp6 combine to form the nucleosome-binding factor SPN.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Portal motor velocity and internal force resisting viral DNA packaging in bacteriophage phi29.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Behavior of supercoiled DNA.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Single-molecule force spectroscopy reveals a highly compliant helical folding for the 30-nm chromatin fiber

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA protection by stress-induced biocrystallization

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

The crystal structure of Dps, a ferritin homolog that binds and protects DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Modulation of Higher Order Chromatin Conformation in Mammalian Cell Nuclei Can Be Mediated by Polyamines and Divalent Cations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

The tetramer d(CpGpCpG) crystallizes as a left-handed double helix

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

The inverted repeat as a recognizable structural feature in supercoiled DNA molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Association of an S1 nuclease-sensitive structure with short direct repeats 5' of Drosophila heat shock genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Ten years of tension: single-molecule DNA mechanics

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Direct mechanical measurements of the elasticity of single DNA molecules by using magnetic beads

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

The elasticity of a single supercoiled DNA molecule

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Stretched and overwound DNA forms a Pauling-like structure with exposed bases

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

A Proposed Structure For The Nucleic Acids

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Optimal heat-induced expression of the Drosophila hsp26 gene requires a promoter sequence containing (CT)n.(GA)n repeats.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

G-quadruplexes in promoters throughout the human genome

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

The functional response of upstream DNA to dynamic supercoiling in vivo

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

The importance of negative superhelicity in inducing the formation of G-quadruplex and i-motif structures in the c-Myc promoter: implications for drug targeting and control of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Transcription-dependent dynamic supercoiling is a short-range genomic force

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Integration of syntactic and semantic properties of the DNA code reveals chromosomes as thermodynamic machines converting energy into information

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA thermodynamics shape chromosome organization and topology

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Activation of transcription initiation from a stable RNA promoter by a Fis protein-mediated DNA structural transmission mechanism

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

The origin of the genetic code

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

The evolution of the genetic code revisited

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13307

Topoisomerase II binds nucleosome-free DNA and acts redundantly with topoisomerase I to enhance recruitment of RNA Pol II in budding yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Gene order and chromosome dynamics coordinate spatiotemporal gene expression during the bacterial growth cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA thermodynamic stability and supercoil dynamics determine the gene expression program during the bacterial growth cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Spatial patterns of transcriptional activity in the chromosome of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Chromatin structure: does the 30-nm fibre exist in vivo?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Linker histones incorporation maintains chromatin fiber plasticity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA elimination in Tetrahymena: a developmental process involving extensive breakage and rejoining of DNA at defined sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Biochemical evidence for the requirement of Hoogsteen base pairing for replication by human DNA polymerase iota

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Sequence-dependent DNA structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

The crystal and molecular structure of a hydrogen-bonded complex between 1-methylthymine and 9-methyladenine

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

DNA Double Helices Recognize Mutual Sequence Homology in a Protein Free Environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

The Major Architects of Chromatin: Architectural Proteins in Bacteria, Archaea and Eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

X-Ray Diffraction Studies of Double Helical Ribonucleic Acid

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

Left-handed Z-DNA is induced by supercoiling in physiological ionic conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13307

21 January 2018

Identifiers

DOI

10.1111/FEBS.13307

0 references

PubMed publication ID

25903461

1 reference