The evolution of Ebola virus: Insights from the 2013–2016 epidemic (Q27231613)

4 October 2017

1 reference

title

The evolution of Ebola virus: Insights from the 2013–2016 epidemic (English)

1 reference

Western African Ebola virus epidemic

4 October 2017

Orthoebolavirus zairense

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1

Edward C. Holmes

1 reference

4 October 2017

Gytis Dudas

2

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Kristian G. Andersen

series ordinal

4

object named as

Kristian G Andersen

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Andrew Rambaut

series ordinal

3

object named as

Andrew Rambaut

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language of work or name

English

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publication date

12 October 2016

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4 October 2017

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4 October 2017

538

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4 October 2017

7624

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4 October 2017

193-200

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Rapid outbreak sequencing of Ebola virus in Sierra Leone identifies transmission chains linked to sporadic cases

4 October 2017

1 reference

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Reduced evolutionary rate in reemerged Ebola virus transmission chains

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Roots, Not Parachutes: Research Collaborations Combat Outbreaks

31 May 2018

1 reference

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Real-time, portable genome sequencing for Ebola surveillance

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Nanopore Sequencing as a Rapidly Deployable Ebola Outbreak Tool

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Ebola Virus Persistence in Semen Ex Vivo

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Systematic review of the literature on viral persistence and sexual transmission from recovered Ebola survivors: evidence and recommendations

31 May 2018

1 reference

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Quantifying influenza virus diversity and transmission in humans

31 May 2018

1 reference

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Evolution and Spread of Ebola Virus in Liberia, 2014-2015

31 May 2018

1 reference

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Genotypic anomaly in Ebola virus strains circulating in Magazine Wharf area, Freetown, Sierra Leone, 2015.

31 May 2018

1 reference

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Ebola virus disease in the Democratic Republic of the Congo, 1976-2014

31 May 2018

1 reference

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Ebola RNA Persistence in Semen of Ebola Virus Disease Survivors - Preliminary Report

31 May 2018

1 reference

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Molecular evidence of sexual transmission of Ebola virus

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Lessons from Ebola: Improving infectious disease surveillance to inform outbreak management

31 May 2018

1 reference

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Delayed Disease Progression in Cynomolgus Macaques Infected with Ebola Virus Makona Strain

31 May 2018

1 reference

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Clinical Sequencing Uncovers Origins and Evolution of Lassa Virus

31 May 2018

1 reference

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Assessing the Evidence Supporting Fruit Bats as the Primary Reservoirs for Ebola Viruses

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

nextflu: real-time tracking of seasonal influenza virus evolution in humans

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Distinct lineages of Ebola virus in Guinea during the 2014 West African epidemic

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Temporal and spatial analysis of the 2014-2015 Ebola virus outbreak in West Africa

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Monitoring of Ebola Virus Makona Evolution through Establishment of Advanced Genomic Capability in Liberia

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Genome sequence analysis of Ebola virus in clinical samples from three British healthcare workers, August 2014 to March 2015.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

How Ebola has been evolving in West Africa.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

New Advances in the Effort against Ebola

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Genetic diversity and evolutionary dynamics of Ebola virus in Sierra Leone

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Possible sexual transmission of Ebola virus - Liberia, 2015.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Phylodynamic analysis of ebola virus in the 2014 sierra leone epidemic

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Virology. Mutation rate and genotype variation of Ebola virus from Mali case sequences

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Transmission of Ebola viruses: what we know and what we do not know

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Coverage of the ebola virus disease epidemic in three widely circulated United States newspapers: implications for preparedness and prevention

31 May 2018

1 reference

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Ebola, Through Air or Not Through Air: That is the Question

31 May 2018

1 reference

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Insights into the early epidemic spread of ebola in sierra leone provided by viral sequence data

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Estimating the Reproduction Number of Ebola Virus (EBOV) During the 2014 Outbreak in West Africa

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Quantifying the epidemic spread of Ebola virus (EBOV) in Sierra Leone using phylodynamics

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Nomenclature- and database-compatible names for the two Ebola virus variants that emerged in Guinea and the Democratic Republic of the Congo in 2014.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Enhanced methods for unbiased deep sequencing of Lassa and Ebola RNA viruses from clinical and biological samples

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Clinical illness and outcomes in patients with Ebola in Sierra Leone

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Ebola virus disease in the Democratic Republic of Congo

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Ebola virus disease in West Africa--the first 9 months of the epidemic and forward projections

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Evidence that ebolaviruses and cuevaviruses have been diverging from marburgviruses since the Miocene

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Ebola in West Africa: the outbreak able to change many things.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Phylogenetic Analysis of Guinea 2014 EBOV Ebolavirus Outbreak

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Emergence of Zaire Ebola Virus Disease in Guinea

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

31 May 2018

Viral pathogen discovery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Next-generation sequencing platforms

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Uncovering epidemiological dynamics in heterogeneous host populations using phylogenetic methods

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Molecular evolution of viruses of the family Filoviridae based on 97 whole-genome sequences

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Bayesian phylogenetics with BEAUti and the BEAST 1.7

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Emergence of divergent Zaire ebola virus strains in Democratic Republic of the Congo in 2007 and 2008

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Estimating the basic reproductive number from viral sequence data.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Ebola virus entry requires the cholesterol transporter Niemann-Pick C1

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Small molecule inhibitors reveal Niemann-Pick C1 is essential for Ebola virus infection

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Filoviruses are ancient and integrated into mammalian genomes

31 May 2018

1 reference

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Sequencing technologies - the next generation

31 May 2018

1 reference

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Bayesian phylogeography finds its roots

31 May 2018

1 reference

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31 May 2018

1 reference

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Next-generation DNA sequencing

31 May 2018

1 reference

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Filoviruses. A compendium of 40 years of epidemiological, clinical, and laboratory studies.

31 May 2018

1 reference

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Isolates of Zaire ebolavirus from wild apes reveal genetic lineage and recombinants

31 May 2018

1 reference

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Evidence for time dependency of molecular rate estimates

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Recent common ancestry of Ebola Zaire virus found in a bat reservoir

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Relaxed phylogenetics and dating with confidence

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Fruit bats as reservoirs of Ebola virus

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Wave-like spread of Ebola Zaire

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Influenza: lessons from past pandemics, warnings from current incidents.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

The population genetics and evolutionary epidemiology of RNA viruses

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Multiple Ebola Virus Transmission Events and Rapid Decline of Central African Wildlife

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

The rate and character of spontaneous mutation in an RNA virus.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Genetic epidemiology of hepatitis C virus throughout egypt

31 May 2018

1 reference

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Ebola hemorrhagic fever outbreaks in Gabon, 1994-1997: epidemiologic and health control issues.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Isolation and phylogenetic characterization of Ebola viruses causing different outbreaks in Gabon

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

The virion glycoproteins of Ebola viruses are encoded in two reading frames and are expressed through transcriptional editing

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Genetic identification of a hantavirus associated with an outbreak of acute respiratory illness

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Phylogenetic relationships of dengue-2 viruses

31 May 2018

1 reference

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The molecular epidemiology of human immunodeficiency virus type 1 in Edinburgh

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Ebola haemorrhagic fever in Zaire, 1976

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Puzzling Origins of the Ebola Outbreak in the Democratic Republic of the Congo, 2014.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Erratum for the Report "Mutation rate and genotype variation of Ebola virus from Mali case sequences" by T. Hoenen, D. Safronetz, A. Groseth, K. R. Wollenberg, O. A. Koita, B. Diarra, I. S. Fall, F. C. Haidara, F. Diallo, M. Sanogo, Y. S. Sarro, A. K

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Infectious Diseases. A reassuring snapshot of Ebola

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Case fatality rate for Ebola virus disease in west Africa

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Analyses of evolutionary dynamics in viruses are hindered by a time-dependent bias in rate estimates.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Inferring the inter-host transmission of influenza A virus using patterns of intra-host genetic variation.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Experimental evolution of RNA versus DNA viruses

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Coronavirus genomic-sequence variations and the epidemiology of the severe acute respiratory syndrome

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Persistence and genetic stability of Ebola virus during the outbreak in Kikwit, Democratic Republic of the Congo, 1995.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5580494

Ebola’s fast evolution questioned

28 November 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNATURE19790

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NATURE19790

1 reference

PMC publication ID

5580494

Dimensions Publication ID

4 October 2017

0 references

1 reference

PMC publication ID

5580494

4 October 2017

PubMed publication ID

27734858

1 reference

PMC publication ID

5580494