Metal ions and flexibility in a viral RNA pseudoknot at atomic resolution (Q27638410)

1

0 references

George Minasov

2

0 references

author name string

Li Su

3

0 references

Alexander Rich

Proceedings of the National Academy of Sciences of the United States of America

4

0 references

language of work or name

English

0 references

publication date

2 April 2002

0 references

published in

0 references

volume

99

0 references

issue

7

0 references

page(s)

4302-7

0 references

cites work

Detection of alkali metal ions in DNA crystals using state-of-the-art X-ray diffraction experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

1 A crystal structures of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

The 1.3 A crystal structure of a biotin-binding pseudoknot and the basis for RNA molecular recognition

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Atomic-resolution crystal structures of B-DNA reveal specific influences of divalent metal ions on conformation and packing

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

SHELXL: high-resolution refinement

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Free R value: a novel statistical quantity for assessing the accuracy of crystal structures

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

A thermodynamic framework for Mg2+ binding to RNA.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Biochemical detection of monovalent metal ion binding sites within RNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Is counterion delocalization responsible for collapse in RNA folding?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Specific mutations in a viral RNA pseudoknot drastically change ribosomal frameshifting efficiency

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Recoding: dynamic reprogramming of translation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Differential response to frameshift signals in eukaryotic and prokaryotic translational systems

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Atomic-resolution structure of the cellulose synthase regulator cyclic diguanylic acid

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Human immunodeficiency virus type 1 gag-pol frameshifting is dependent on downstream mRNA secondary structure: demonstration by expression in vivo

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Solution structure and thermodynamics of a divalent metal ion binding site in an RNA pseudoknot

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Characterization of ribosomal frameshifting in HIV-1 gag-pol expression

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123643

Processing of X-ray diffraction data collected in oscillation mode

2 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.062055599

AMoRe: an automated package for molecular replacement

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.062055599

Stabilization of RNA structure by Mg ions. Specific and non-specific effects.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.062055599

Energetics of a strongly pH dependent RNA tertiary structure in a frameshifting pseudoknot

21 January 2018

1 reference

12 December 2020

Stabilization of RNA tertiary structure by monovalent cations

1 reference

12 December 2020

Programmed translational frameshifting

1 reference

12 December 2020

A specific monovalent metal ion integral to the AA platform of the RNA tetraloop receptor

1 reference

12 December 2020

Equilibrium unfolding (folding) pathway of a model H-type pseudoknotted RNA: the role of magnesium ions in stability

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.062055599

1 reference

ADS bibcode

2002PNAS...99.4302E

0 references

1 reference

1 reference

PubMed publication ID

11904368

1 reference