Oligomerization of BenM, a LysR-type transcriptional regulator: structural basis for the aggregation of proteins in this family (Q27645667)

1

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Sandra Haddad

2

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Ellen L Neidle

3

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Cory Momany

Acta Crystallographica Section F: Structural Biology Communications

4

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language of work or name

1 reference

1 May 2007

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published in

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volume

63

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issue

Pt 5

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page(s)

361-8

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cites work

Distinct effector-binding sites enable synergistic transcriptional activation by BenM, a LysR-type regulator

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Crystal structure of a full-length LysR-type transcriptional regulator, CbnR: unusual combination of two subunit forms and molecular bases for causing and changing DNA bend

20 March 2017

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Effect of pH and salt bridges on structural assembly: Molecular structures of the monomer and intertwined dimer of the Eps8 SH3 domain

20 March 2017

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Structural basis of the redox switch in the OxyR transcription factor

20 March 2017

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The structure of the cofactor-binding fragment of the LysR family member, CysB: a familiar fold with a surprising subunit arrangement

20 March 2017

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Refinement of macromolecular structures by the maximum-likelihood method

20 March 2017

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20 March 2017

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Automated protein model building combined with iterative structure refinement

20 March 2017

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20 March 2017

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Principles of protein-protein interactions

20 March 2017

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Main-chain bond lengths and bond angles in protein structures

20 March 2017

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Improved methods for building protein models in electron density maps and the location of errors in these models

20 March 2017

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Molecular mechanism of the regulation of Bacillus subtilis gltAB expression by GltC

20 March 2017

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A deliberate approach to screening for initial crystallization conditions of biological macromolecules

20 March 2017

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Molecular biology of the LysR family of transcriptional regulators

7 April 2017

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CatM regulation of the benABCDE operon: functional divergence of two LysR-type paralogs in Acinetobacter baylyi ADP1.

7 April 2017

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Bacterial transcriptional regulators for degradation pathways of aromatic compounds

29 September 2017

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Development of a bacterial biosensor for nitrotoluenes: the crystal structure of the transcriptional regulator DntR.

29 September 2017

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Benzoate decreases the binding of cis,cis-muconate to the BenM regulator despite the synergistic effect of both compounds on transcriptional activation.

29 September 2017

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Transcriptional cross-regulation of the catechol and protocatechuate branches of the beta-ketoadipate pathway contributes to carbon source-dependent expression of the Acinetobacter sp. strain ADP1 pobA gene.

29 September 2017

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Synergistic transcriptional activation by one regulatory protein in response to two metabolites

29 September 2017

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The benPK operon, proposed to play a role in transport, is part of a regulon for benzoate catabolism in Acinetobacter sp. strain ADP1.

29 September 2017

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Bacterial promoters triggering biodegradation of aromatic pollutants

29 September 2017

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Regulation of benzoate degradation in Acinetobacter sp. strain ADP1 by BenM, a LysR-type transcriptional activator.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2334995

Stoichiometry of binding of CysB to the cysJIH, cysK, and cysP promoter regions of Salmonella typhimurium

29 September 2017

1 reference

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A large family of bacterial activator proteins

29 September 2017

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Protein-protein crystal-packing contacts

29 September 2017

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Structural basis of the sulphate starvation response in E. coli: crystal structure and mutational analysis of the cofactor-binding domain of the Cbl transcriptional regulator.

2 June 2018

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Purification and crystallization of a LysR-type transcriptional regulator CBNR from Ralstonia eutropha NH9.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2334995

Protein domain interfaces: characterization and comparison with oligomeric protein interfaces

27 November 2018

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Overproduction, solubilization, purification and DNA-binding properties of AmpR from Citrobacter freundii.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2334995

Use of saturation mutagenesis to localize probable functional domains in the NahR protein, a LysR-type transcription activator.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2334995

Solution of the structure of the cofactor-binding fragment of CysB: a struggle against non-isomorphism

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17565172

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Processing of X-ray diffraction data collected in oscillation mode

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17565172

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The role of oil in macromolecular crystallization

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17565172