Kinetic response of a photoperturbed allosteric protein (Q27678876)

24 June 2017

title

Kinetic response of a photoperturbed allosteric protein (English)

1 reference

24 June 2017

8

0 references

Amedeo Caflisch

8

object named as

Amedeo Caflisch

1 reference

24 June 2017

Brigitte Stucki-Buchli

object named as

Brigitte Buchli

1

0 references

Peter Hamm

object named as

Peter Hamm

10

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author name string

Steven A Waldauer

2

1 reference

24 June 2017

Reto Walser

3

1 reference

24 June 2017

Mateusz L Donten

4

1 reference

24 June 2017

Rolf Pfister

5

1 reference

24 June 2017

Nicolas Blöchliger

6

1 reference

24 June 2017

Sandra Steiner

7

1 reference

24 June 2017

Oliver Zerbe

9

1 reference

24 June 2017

language of work or name

English

0 references

publication date

1 July 2013

1 reference

Proceedings of the National Academy of Sciences of the United States of America

24 June 2017

published in

1 reference

24 June 2017

volume

110

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24 June 2017

issue

29

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24 June 2017

page(s)

11725-11730

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A Conformational Switch in the CRIB-PDZ Module of Par-6

24 June 2017

cites work

1 reference

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20 March 2017

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PDZ domains and their binding partners: structure, specificity, and modification

20 March 2017

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Demonstration of long-range interactions in a PDZ domain by NMR, kinetics, and protein engineering

20 March 2017

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Ligand-dependent dynamics and intramolecular signaling in a PDZ domain

20 March 2017

1 reference

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Solution structure of the PDZ2 domain from cytosolic human phosphatase hPTP1E complexed with a peptide reveals contribution of the beta2-beta3 loop to PDZ domain-ligand interactions

20 March 2017

1 reference

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Solution structure of the PDZ2 domain from human phosphatase hPTP1E and its interactions with C-terminal peptides from the Fas receptor

20 March 2017

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Crystal structure of the hCASK PDZ domain reveals the structural basis of class II PDZ domain target recognition

20 March 2017

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All-atom empirical potential for molecular modeling and dynamics studies of proteins

20 March 2017

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GROMACS: fast, flexible, and free

20 March 2017

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ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODEL

20 March 2017

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Mechanism and role of PDZ domains in signaling complex assembly

20 March 2017

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Ezrin induces long-range interdomain allostery in the scaffolding protein NHERF1

20 March 2017

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An allosteric intramolecular PDZ-PDZ interaction modulates PTP-BL PDZ2 binding specificity

20 March 2017

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PDZ domains: folding and binding

20 March 2017

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Extending the treatment of backbone energetics in protein force fields: limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations

20 March 2017

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Recognition of unique carboxyl-terminal motifs by distinct PDZ domains

7 April 2017

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Evolutionarily conserved networks of residues mediate allosteric communication in proteins

7 April 2017

1 reference

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Evolutionarily conserved pathways of energetic connectivity in protein families

7 April 2017

1 reference

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Comparison of Experimental Binding Data and Theoretical Models in Proteins Containing Subunits*

7 April 2017

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The Energy Landscapes and Motions of Proteins

7 April 2017

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Accurate prediction of the dynamical changes within the second PDZ domain of PTP1e

7 April 2017

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Measurement of energy landscape roughness of folded and unfolded proteins

29 September 2017

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Folding of the four-helix bundle FF domain from a compact on-pathway intermediate state is governed predominantly by water motion

29 September 2017

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Change in allosteric network affects binding affinities of PDZ domains: analysis through perturbation response scanning

29 September 2017

1 reference

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Hidden dynamic allostery in a PDZ domain.

29 September 2017

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A unified model of protein dynamics.

29 September 2017

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Alpha-Helix folding in the presence of structural constraints.

29 September 2017

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Signaling pathways of PDZ2 domain: a molecular dynamics interaction correlation analysis

29 September 2017

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Reassessing a sparse energetic network within a single protein domain

29 September 2017

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Conformational entropy in molecular recognition by proteins

29 September 2017

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Dynamically driven protein allostery.

29 September 2017

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Functional dynamics of PDZ binding domains: a normal-mode analysis

29 September 2017

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Kinetics are probe-dependent during downhill folding of an engineered lambda6-85 protein

29 September 2017

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Protein conformational dynamics probed by single-molecule electron transfer.

29 September 2017

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PDZ domains-glue and guide.

29 September 2017

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Experimental identification of downhill protein folding.

29 September 2017

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Slaving: solvent fluctuations dominate protein dynamics and functions

29 September 2017

1 reference

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Ultrafast spectroscopy reveals subnanosecond peptide conformational dynamics and validates molecular dynamics simulation

29 September 2017

1 reference

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Photo-control of helix content in a short peptide

29 September 2017

1 reference

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Is cooperative oxygen binding by hemoglobin really understood?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3718176

Structural and dynamic changes of photoactive yellow protein during its photocycle in solution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3718176

Nonexponential protein relaxation: dynamics of conformational change in myoglobin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3718176

Can a two-state MWC allosteric model explain hemoglobin kinetics?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3718176

Crystal structure of the DegS stress sensor: How a PDZ domain recognizes misfolded protein and activates a protease

2 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1306323110

Intramolecular signaling pathways revealed by modeling anisotropic thermal diffusion

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1306323110

Mapping of two networks of residues that exhibit structural and dynamical changes upon binding in a PDZ domain protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1306323110

Structure-based approach to the photocontrol of protein folding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1306323110

Synthesis of 3,3'-bis(sulfonato)-4,4'-bis(chloroacetamido)azobenzene and cysteine cross-linking for photo-control of protein conformation and activity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1306323110

Monitoring the Kinetics of Ion-Dependent Protein Folding by Time-Resolved NMR Spectroscopy at Atomic Resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1306323110

Evaluation of energetic and dynamic coupling networks in a PDZ domain protein

21 January 2018

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12 December 2020

Allostery without conformational change. A plausible model

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12 December 2020

Solvent mobility and the protein 'glass' transition

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12 December 2020

Pump-probe molecular dynamics as a tool for studying protein motion and long range coupling

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12 December 2020

Identifiers

DOI

10.1073/PNAS.1306323110

1 reference

OpenCitations bibliographic resource ID

24 June 2017

0 references

3875710

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3875710

1 reference