NMR Structure and Dynamics of the C-Terminal Domain from Human Rev1 and Its Complex with Rev1 Interacting Region of DNA Polymerase η (Q27681120)

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4 February 2020

title

NMR structure and dynamics of the C-terminal domain from human Rev1 and its complex with Rev1 interacting region of DNA polymerase η (English)

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4 February 2020

5

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4 February 2020

author name string

Alexandra Pozhidaeva

1

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4 February 2020

Yulia Pustovalova

2

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4 February 2020

Sanjay D'Souza

3

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4 February 2020

Irina Bezsonova

4

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4 February 2020

Dmitry M Korzhnev

6

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language of work or name

English

0 references

publication date

28 June 2012

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4 February 2020

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4 February 2020

volume

51

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4 February 2020

issue

27

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4 February 2020

page(s)

5506-5520

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Regulation of Rev1 by the Fanconi anemia core complex

4 February 2020

cites work

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Crystal structure of human REV7 in complex with a human REV3 fragment and structural implication of the interaction between DNA polymerase zeta and REV1

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TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts

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Structure of the Human Rev1–DNA–dNTP Ternary Complex

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Eukaryotic translesion polymerases and their roles and regulation in DNA damage tolerance

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Vertebrate DNA damage tolerance requires the C-terminus but not BRCT or transferase domains of REV1

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Mouse Rev1 protein interacts with multiple DNA polymerases involved in translesion DNA synthesis

20 March 2017

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Interactions in the error-prone postreplication repair proteins hREV1, hREV3, and hREV7

20 March 2017

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The function of the human homolog of Saccharomyces cerevisiae REV1 is required for mutagenesis induced by UV light

20 March 2017

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20 March 2017

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

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20 March 2017

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Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation

20 March 2017

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Comparative analysis of in vivo interactions between Rev1 protein and other Y-family DNA polymerases in animals and yeasts

20 March 2017

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A ubiquitin-binding motif in the translesion DNA polymerase Rev1 mediates its essential functional interaction with ubiquitinated proliferating cell nuclear antigen in response to DNA damage

20 March 2017

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RAD6-dependent DNA repair is linked to modification of PCNA by ubiquitin and SUMO.

20 March 2017

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Efficient bypass of a thymine-thymine dimer by yeast DNA polymerase, Poleta

20 March 2017

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Deoxycytidyl transferase activity of yeast REV1 protein

20 March 2017

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REV1 and polymerase ζ facilitate homologous recombination repair

20 March 2017

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Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast

20 March 2017

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Deoxycytidyl transferase activity of the human REV1 protein is closely associated with the conserved polymerase domain

20 March 2017

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Rev1 employs a novel mechanism of DNA synthesis using a protein template

20 March 2017

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Co-localization in replication foci and interaction of human Y-family members, DNA polymerase pol eta and REVl protein

20 March 2017

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Interaction of hREV1 with three human Y-family DNA polymerases

20 March 2017

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Stability of alpha-helices

20 March 2017

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The vital role of polymerase ζ and REV1 in mutagenic, but not correct, DNA synthesis across benzo[a]pyrene-dG and recruitment of polymerase ζ by REV1 to replication-stalled site

20 March 2017

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The role of dynamic conformational ensembles in biomolecular recognition

20 March 2017

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Ubiquitin-binding domains in Y-family polymerases regulate translesion synthesis

7 April 2017

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Eukaryotic translesion synthesis DNA polymerases: specificity of structure and function

7 April 2017

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Backbone dynamics of Escherichia coli ribonuclease HI: correlations with structure and function in an active enzyme

7 April 2017

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Y-family DNA polymerases and their role in tolerance of cellular DNA damage.

7 April 2017

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Stalled Polη at its cognate substrate initiates an alternative translesion synthesis pathway via interaction with REV1.

29 September 2017

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DNA damage bypass operates in the S and G2 phases of the cell cycle and exhibits differential mutagenicity

29 September 2017

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The non-canonical protein binding site at the monomer-monomer interface of yeast proliferating cell nuclear antigen (PCNA) regulates the Rev1-PCNA interaction and Polζ/Rev1-dependent translesion DNA synthesis

29 September 2017

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Timing and spacing of ubiquitin-dependent DNA damage bypass

29 September 2017

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Roles of sequential ubiquitination of PCNA in DNA-damage tolerance

29 September 2017

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DNA polymerases and cancer.

29 September 2017

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Error-prone translesion synthesis mediates acquired chemoresistance

29 September 2017

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Ubiquitin-dependent DNA damage bypass is separable from genome replication

29 September 2017

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Multiple two-polymerase mechanisms in mammalian translesion DNA synthesis.

29 September 2017

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Protein dynamics and conformational disorder in molecular recognition

29 September 2017

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Y-family DNA polymerases in mammalian cells

29 September 2017

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Two-polymerase mechanisms dictate error-free and error-prone translesion DNA synthesis in mammals

29 September 2017

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Novel conserved motifs in Rev1 C-terminus are required for mutagenic DNA damage tolerance

29 September 2017

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PCNA ubiquitination and REV1 define temporally distinct mechanisms for controlling translesion synthesis in the avian cell line DT40.

29 September 2017

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Tailoring relaxation dispersion experiments for fast-associating protein complexes

29 September 2017

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Evidence that in xeroderma pigmentosum variant cells, which lack DNA polymerase eta, DNA polymerase iota causes the very high frequency and unique spectrum of UV-induced mutations

29 September 2017

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Translesion synthesis: Y-family polymerases and the polymerase switch

29 September 2017

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Ubiquitin-binding motifs in REV1 protein are required for its role in the tolerance of DNA damage

29 September 2017

1 reference

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Novel role for the C terminus of Saccharomyces cerevisiae Rev1 in mediating protein-protein interactions.

29 September 2017

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REV1 protein interacts with PCNA: significance of the REV1 BRCT domain in vitro and in vivo

29 September 2017

1 reference

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The critical mutagenic translesion DNA polymerase Rev1 is highly expressed during G(2)/M phase rather than S phase

29 September 2017

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A simple method to predict protein flexibility using secondary chemical shifts

29 September 2017

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Trading places: how do DNA polymerases switch during translesion DNA synthesis?

29 September 2017

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Portraits of a Y-family DNA polymerase

29 September 2017

1 reference

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Cellular functions of DNA polymerase zeta and Rev1 protein

29 September 2017

1 reference

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Quantitative analysis of translesion DNA synthesis across a benzo[a]pyrene-guanine adduct in mammalian cells: the role of DNA polymerase kappa

29 September 2017

1 reference

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Low-populated folding intermediates of Fyn SH3 characterized by relaxation dispersion NMR.

29 September 2017

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29 September 2017

DNA replication fidelity

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Translesion synthesis of acetylaminofluorene-dG adducts by DNA polymerase zeta is stimulated by yeast Rev1 protein

29 September 2017

1 reference

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Cellular roles of DNA polymerase zeta and Rev1 protein

29 September 2017

1 reference

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Error-prone repair DNA polymerases in prokaryotes and eukaryotes

29 September 2017

1 reference

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Yeast Rev1 protein is a G template-specific DNA polymerase

29 September 2017

1 reference

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Kinetic studies of protein-protein interactions

29 September 2017

1 reference

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Nuclear magnetic resonance methods for quantifying microsecond-to-millisecond motions in biological macromolecules

29 September 2017

1 reference

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Mutagenesis in eukaryotes dependent on DNA polymerase zeta and Rev1p

29 September 2017

1 reference

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Domain structure, localization, and function of DNA polymerase eta, defective in xeroderma pigmentosum variant cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3732116

The RAD6 DNA damage tolerance pathway operates uncoupled from the replication fork and is functional beyond S phase.

29 September 2017

1 reference

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Identification of a novel REV1-interacting motif necessary for DNA polymerase kappa function.

2 June 2018

1 reference

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Stable proline box motif at the N-terminal end of alpha-helices

2 June 2018

1 reference

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Xeroderma pigmentosum variant (XP-V) correcting protein from HeLa cells has a thymine dimer bypass DNA polymerase activity

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3732116

Interaction with DNA polymerase eta is required for nuclear accumulation of REV1 and suppression of spontaneous mutations in human cells.

2 June 2018

1 reference

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An improved 15N relaxation dispersion experiment for the measurement of millisecond time-scale dynamics in proteins

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3732116

Application of the random coil index to studying protein flexibility

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3732116

A single amino acid governs enhanced activity of DinB DNA polymerases on damaged templates.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3732116

Are acidic and basic groups in buried proteins predicted to be ionized?

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3732116

Proliferating cell nuclear antigen-dependent coordination of the biological functions of human DNA polymerase iota.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3732116

Estimating the time scale of chemical exchange of proteins from measurements of transverse relaxation rates in solution.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3732116

Multiple Mechanisms Control Chromosome Integrity after Replication Fork Uncoupling and Restart at Irreparable UV Lesions

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22691049

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Evidence for a second function for Saccharomyces cerevisiae Rev1p

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22691049

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Off-resonance effects in 15N T2 CPMG measurements

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22691049

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/BI300566Z

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22691049%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22691049%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

PubMed publication ID

22691049

2 references