Architecture of the SWI/SNF-nucleosome complex (Q27931306)

18644858

1 December 2016

title

Architecture of the SWI/SNF-nucleosome complex (English)

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1 December 2016

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Swp82p YFL049W

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Swi3p YJL176C

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Swi1p YPL016W

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TATA-binding protein-associated factor TAF14 YPL129W

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Snf6p YHL025W

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Snf11p YDR073W

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Arp9p YMR033W

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Arp7p YPR034W

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Snf5p YBR289W

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SWI/SNF catalytic subunit SNF2 YOR290C

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Rtt102p YGR275W

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author name string

Mekonnen Lemma Dechassa

1

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Bei Zhang

2

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Rachel Horowitz-Scherer

3

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Jim Persinger

4

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Christopher L Woodcock

5

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Craig L Peterson

6

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Blaine Bartholomew

Molecular and Cellular Biology

7

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language of work or name

English

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publication date

October 2008

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published in

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18644858

Swi3p controls SWI/SNF assembly and ATP-dependent H2A-H2B displacement

1 December 2016

volume

28

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issue

19

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page(s)

6010-21

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cites work

1 reference

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DNA translocation and loop formation mechanism of chromatin remodeling by SWI/SNF and RSC.

20 March 2017

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Chromatin dynamics at DNA replication, transcription and repair

20 March 2017

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Differential targeting of two distinct SWI/SNF-related Drosophila chromatin-remodeling complexes

20 March 2017

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Histone H2A/H2B dimer exchange by ATP-dependent chromatin remodeling activities

20 March 2017

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A multiplicity of coactivators is required by Gcn4p at individual promoters in vivo

20 March 2017

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Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution

20 March 2017

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Transcription activator interactions with multiple SWI/SNF subunits.

20 March 2017

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Octamer transfer and creation of stably remodeled nucleosomes by human SWI-SNF and its isolated ATPases

20 March 2017

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Transcriptional activation by Gcn4p involves independent interactions with the SWI/SNF complex and the SRB/mediator

20 March 2017

1 reference

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Reconstitution of a core chromatin remodeling complex from SWI/SNF subunits

20 March 2017

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TFG/TAF30/ANC1, a component of the yeast SWI/SNF complex that is similar to the leukemogenic proteins ENL and AF-9.

20 March 2017

1 reference

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Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex

20 March 2017

1 reference

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SNF11, a new component of the yeast SNF-SWI complex that interacts with a conserved region of SNF2.

20 March 2017

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Dissecting the regulatory circuitry of a eukaryotic genome

20 March 2017

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Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome

20 March 2017

1 reference

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ATP-dependent nucleosome remodeling

20 March 2017

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Chromatin remodeling: insights and intrigue from single-molecule studies

7 April 2017

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Conformational flexibility in the chromatin remodeler RSC observed by electron microscopy and the orthogonal tilt reconstruction method

29 September 2017

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Mechanisms of ATP dependent chromatin remodeling

29 September 2017

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Solution AFM studies of human Swi-Snf and its interactions with MMTV DNA and chromatin

29 September 2017

1 reference

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Evidence for histone eviction in trans upon induction of the yeast PHO5 promoter

29 September 2017

1 reference

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Topography of the ISW2-nucleosome complex: insights into nucleosome spacing and chromatin remodeling

29 September 2017

1 reference

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Cellular machineries for chromosomal DNA repair.

29 September 2017

1 reference

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Visualization and 3D structure determination of defined sequence chromatin and chromatin remodeling complexes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2547009

Recruitment of SWI/SNF by Gcn4p Does Not Require Snf2p or Gcn5p but Depends Strongly on SWI/SNF Integrity, SRB Mediator, and SAGA

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2547009

Structural analysis of the RSC chromatin-remodeling complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2547009

Generation and interconversion of multiple distinct nucleosomal states as a mechanism for catalyzing chromatin fluidity

29 September 2017

1 reference

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Generation of superhelical torsion by ATP-dependent chromatin remodeling activities

29 September 2017

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Expression and purification of recombinant histones and nucleosome reconstitution

29 September 2017

1 reference

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Whole-genome expression analysis of snf/swi mutants of Saccharomyces cerevisiae

29 September 2017

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Use of DNA photoaffinity labeling to study nucleosome remodeling by SWI/SNF.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2547009

Recruitment of the SWI/SNF chromatin remodeling complex by transcriptional activators

29 September 2017

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Survey of four different photoreactive moieties for DNA photoaffinity labeling of yeast RNA polymerase III transcription complexes

29 September 2017

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Mapping the contacts of yeast TFIIIB and RNA polymerase III at various distances from the major groove of DNA by DNA photoaffinity labeling

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2547009

Activation domains drive nucleosome eviction by SWI/SNF.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2547009

Seeing GroEL at 6 A resolution by single particle electron cryomicroscopy

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2547009

Chromatin remodeling and transcription

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2547009

Persistent site-specific remodeling of a nucleosome array by transient action of the SWI/SNF complex.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2547009

Critical amino acids in the transcriptional activation domain of the herpesvirus protein VP16 are solvent-exposed in highly mobile protein segments. An intrinsic fluorescence study.

2 June 2018

1 reference

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IL-12 receptor. I. Characterization of the receptor on phytohemagglutinin-activated human lymphoblasts

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2547009

Probing SWI/SNF remodeling of the nucleosome by unzipping single DNA molecules.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2547009

The histone chaperone Asf1 increases the rate of histone eviction at the yeast PHO5 and PHO8 promoters.

27 November 2018

1 reference

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Chromatin remodeling through directional DNA translocation from an internal nucleosomal site.

27 November 2018

1 reference

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27 November 2018

1 reference

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Removal of promoter nucleosomes by disassembly rather than sliding in vivo

27 November 2018

1 reference

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1 reference

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27 November 2018

1 reference

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Structural analysis of the yeast SWI/SNF chromatin remodeling complex.

27 November 2018

1 reference

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The interactions of yeast SWI/SNF and RSC with the nucleosome before and after chromatin remodeling

27 November 2018

1 reference

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Activation domain-mediated targeting of the SWI/SNF complex to promoters stimulates transcription from nucleosome arrays

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Identifiers

DOI

10.1128/MCB.00693-08

1 reference

1 reference

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18644858

1 reference