The RNA polymerase II subunit Rpb4p mediates decay of a specific class of mRNAs (Q27933345)

GOA release 2020-03-11

author name string

Rona Lotan

1

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Vicky Goler Bar-On

2

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Liat Harel-Sharvit

3

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Lea Duek

4

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Daniel Melamed

5

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Mordechai Choder

TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1.

6

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language of work or name

English

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publication date

15 December 2005

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1 reference

1 December 2016

19

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issue

24

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page(s)

3004-16

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cites work

1 reference

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20 March 2017

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20 March 2017

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Rpb4p, a subunit of RNA polymerase II, mediates mRNA export during stress

20 March 2017

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20 March 2017

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20 March 2017

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Decapping and Decay of Messenger RNA Occur in Cytoplasmic Processing Bodies

20 March 2017

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The human LSm1-7 proteins colocalize with the mRNA-degrading enzymes Dcp1/2 and Xrnl in distinct cytoplasmic foci

20 March 2017

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Human Dcp2: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures

20 March 2017

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Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay

20 March 2017

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Ccr4p is the catalytic subunit of a Ccr4p/Pop2p/Notp mRNA deadenylase complex in Saccharomyces cerevisiae

20 March 2017

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Functional organization of the yeast proteome by systematic analysis of protein complexes

20 March 2017

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Targeting an mRNA for decapping: displacement of translation factors and association of the Lsm1p-7p complex on deadenylated yeast mRNAs

20 March 2017

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Deletion of the RNA polymerase subunit RPB4 acts as a global, not stress-specific, shut-off switch for RNA polymerase II transcription at high temperatures

20 March 2017

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Messenger RNAs are recruited for nuclear export during transcription

20 March 2017

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The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae

20 March 2017

1 reference

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The Puf3 protein is a transcript-specific regulator of mRNA degradation in yeast

20 March 2017

1 reference

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The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p

20 March 2017

1 reference

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Yeast Sm-like proteins function in mRNA decapping and decay

20 March 2017

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A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

20 March 2017

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Rpb7 can interact with RNA polymerase II and support transcription during some stresses independently of Rpb4

20 March 2017

1 reference

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Cluster analysis and display of genome-wide expression patterns

20 March 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Human RNA polymerase II subunit hsRPB7 functions in yeast and influences stress survival and cell morphology

20 March 2017

1 reference

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A general topoisomerase I-dependent transcriptional repression in the stationary phase in yeast

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

The economics of ribosome biosynthesis in yeast

20 March 2017

1 reference

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Genomic run-on evaluates transcription rates for all yeast genes and identifies gene regulatory mechanisms

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

General translational repression by activators of mRNA decapping

20 March 2017

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Processing bodies require RNA for assembly and contain nontranslating mRNAs

7 April 2017

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Eukaryotic mRNA decapping

7 April 2017

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The enzymes and control of eukaryotic mRNA turnover

7 April 2017

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Precision and functional specificity in mRNA decay

7 April 2017

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Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells

7 April 2017

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A turnover pathway for both stable and unstable mRNAs in yeast: evidence for a requirement for deadenylation

7 April 2017

1 reference

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The poly(A) binding protein is required for poly(A) shortening and 60S ribosomal subunit-dependent translation initiation

7 April 2017

1 reference

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Ribosome synthesis meets the cell cycle

7 April 2017

1 reference

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Rpb4 and Rpb7: subunits of RNA polymerase II and beyond

29 September 2017

1 reference

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Bringing the role of mRNA decay in the control of gene expression into focus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

mRNA export: an assembly line from genes to nuclear pores

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Global control of gene expression in yeast by the Ccr4-Not complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Rpb7 subunit of RNA polymerase II interacts with an RNA-binding protein involved in processing of transcripts

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Economics of ribosome biosynthesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

The genomics of yeast responses to environmental stress and starvation

29 September 2017

1 reference

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Curbing the nonsense: the activation and regulation of mRNA surveillance

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Multiple mechanisms of suppression circumvent transcription defects in an RNA polymerase mutant

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Mutations in VPS16 and MRT1 stabilize mRNAs by activating an inhibitor of the decapping enzyme

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Transcriptional elements involved in the repression of ribosomal protein synthesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Mutations in translation initiation factors lead to increased rates of deadenylation and decapping of mRNAs in Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Rpb4, a subunit of RNA polymerase II, enables the enzyme to transcribe at temperature extremes in vitro

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Poly(A) tail length control in Saccharomyces cerevisiae occurs by message-specific deadenylation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

A portion of RNA polymerase II molecules has a component essential for stress responses and stress survival

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Stabilization and ribosome association of unspliced pre-mRNAs in a yeast upf1- mutant

29 September 2017

1 reference

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Immunoglobulin mRNA stability varies during B lymphocyte differentiation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Mild temperature shock affects transcription of yeast ribosomal protein genes as well as the stability of their mRNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

RNA polymerase II subunit RPB4 is essential for high- and low-temperature yeast cell growth

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Changes in the stability of a human H3 histone mRNA during the HeLa cell cycle

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Glucose triggers different global responses in yeast, depending on the strength of the signal, and transiently stabilizes ribosomal protein mRNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Control of messenger RNA stability in higher eukaryotes

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Whole genome expression profiles of yeast RNA polymerase II core subunit, Rpb4, in stress and nonstress conditions.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

RPB7, one of two dissociable subunits of yeast RNA polymerase II, is essential for cell viability

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1315404

Glucose starvation induces a drastic reduction in the rates of both transcription and degradation of mRNA in yeast

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16357218

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Rpb4p is necessary for RNA polymerase II activity at high temperature

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16357218