A BBP-Mud2p heterodimer mediates branchpoint recognition and influences splicing substrate abundance in budding yeast (Q27937221)

1 December 2016

title

A BBP-Mud2p heterodimer mediates branchpoint recognition and influences splicing substrate abundance in budding yeast (English)

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1 December 2016

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GOA release 2020-03-11

author name string

Qiang Wang

1

0 references

Li Zhang

2

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Bert Lynn

3

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Brian C Rymond

4

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language of work or name

English

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publication date

May 2008

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published in

Nucleic Acids Research

1 reference

Binding specificities of the GYF domains from two Saccharomyces cerevisiae paralogs

1 December 2016

volume

36

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issue

8

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page(s)

2787-98

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cites work

1 reference

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Control of pre-mRNA splicing by the general splicing factors PUF60 and U2AF(65)

20 March 2017

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Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants

20 March 2017

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Interactions of the yeast SF3b splicing factor

20 March 2017

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The human U5 snRNP 52K protein (CD2BP2) interacts with U5-102K (hPrp6), a U4/U6.U5 tri-snRNP bridging protein, but dissociates upon tri-snRNP formation

20 March 2017

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Proteomic analysis identifies a new complex required for nuclear pre-mRNA retention and splicing

20 March 2017

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Nuclear retention of unspliced mRNAs in yeast is mediated by perinuclear Mlp1.

20 March 2017

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Global analysis of protein expression in yeast

20 March 2017

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Global analysis of protein localization in budding yeast

20 March 2017

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Rds3p Is Required for Stable U2 snRNP Recruitment to the Splicing Apparatus

20 March 2017

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Genetic interactions with CLF1 identify additional pre-mRNA splicing factors and a link between activators of yeast vesicular transport and splicing.

20 March 2017

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The Clf1p splicing factor promotes spliceosome assembly through N-terminal tetratricopeptide repeat contacts

20 March 2017

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Proteins interacting with Lin 1p, a putative link between chromosome segregation, mRNA splicing and DNA replication in Saccharomyces cerevisiae

20 March 2017

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Crooked neck is a component of the human spliceosome and implicated in the splicing process

20 March 2017

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Functional and physical interactions between components of the Prp19p-associated complex

20 March 2017

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Biochemical and genetic analyses of the U5, U6, and U4/U6 x U5 small nuclear ribonucleoproteins from Saccharomyces cerevisiae

20 March 2017

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PUF60: a novel U2AF65-related splicing activity

20 March 2017

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Yeast ortholog of the Drosophila crooked neck protein promotes spliceosome assembly through stable U4/U6.U5 snRNP addition

20 March 2017

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Transient interaction of BBP/ScSF1 and Mud2 with the splicing machinery affects the kinetics of spliceosome assembly

20 March 2017

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Interaction of the U1 snRNP with nonconserved intronic sequences affects 5' splice site selection.

20 March 2017

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20 March 2017

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A potential role for U2AF-SAP 155 interactions in recruiting U2 snRNP to the branch site

20 March 2017

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A cooperative interaction between U2AF65 and mBBP/SF1 facilitates branchpoint region recognition

20 March 2017

1 reference

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Mechanical devices of the spliceosome: motors, clocks, springs, and things

20 March 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

The splicing factor BBP interacts specifically with the pre-mRNA branchpoint sequence UACUAAC.

20 March 2017

1 reference

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Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals

20 March 2017

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In vivo commitment to splicing in yeast involves the nucleotide upstream from the branch site conserved sequence and the Mud2 protein

20 March 2017

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Commitment of yeast pre-mRNA to the splicing pathway requires a novel U1 small nuclear ribonucleoprotein polypeptide, Prp39p

20 March 2017

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Immunofluorescence localization of the unconventional myosin, Myo2p, and the putative kinesin-related protein, Smy1p, to the same regions of polarized growth in Saccharomyces cerevisiae

20 March 2017

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The yeast MUD2 protein: an interaction with PRP11 defines a bridge between commitment complexes and U2 snRNP addition

20 March 2017

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Identification, purification, and biochemical characterization of U2 small nuclear ribonucleoprotein auxiliary factor

20 March 2017

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The yeast PRP6 gene encodes a U4/U6 small nuclear ribonucleoprotein particle (snRNP) protein, and the PRP9 gene encodes a protein required for U2 snRNP binding

20 March 2017

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New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites

20 March 2017

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Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast

20 March 2017

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20 March 2017

1 reference

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20 March 2017

1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

The splicing factor U2AF35 mediates critical protein-protein interactions in constitutive and enhancer-dependent splicing

20 March 2017

1 reference

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RNA regulons: coordination of post-transcriptional events

20 March 2017

1 reference

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1 reference

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7 April 2017

1 reference

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7 April 2017

1 reference

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29 September 2017

1 reference

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29 September 2017

1 reference

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29 September 2017

1 reference

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29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

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29 September 2017

1 reference

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29 September 2017

1 reference

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1 reference

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29 September 2017

1 reference

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29 September 2017

1 reference

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29 September 2017

1 reference

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29 September 2017

1 reference

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29 September 2017

1 reference

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1 reference

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29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

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29 September 2017

1 reference

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29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

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29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

A subset of Mer1p-dependent introns requires Bud13p for splicing activation and nuclear retention

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

Cotranscriptional spliceosome assembly dynamics and the role of U1 snRNA:5'ss base pairing in yeast

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

Both subunits of U2AF recognize the 3' splice site in Caenorhabditis elegans

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

Meiosis-specific RNA splicing in yeast

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

Intron Removal Requires Proofreading of U2AF/3' Splice Site Recognition by DEK

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

The Structure of Prp40 FF1 Domain and Its Interaction with the crn-TPR1 Motif of Clf1 Gives a New Insight into the Binding Mode of FF Domains

27 November 2018

1 reference

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Genome-wide analysis reveals an unexpected function for the Drosophila splicing factor U2AF50 in the nuclear export of intronless mRNAs.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

Inhibition of msl-2 splicing by Sex-lethal reveals interaction between U2AF35 and the 3' splice site AG.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2377449

mRNA splicing efficiency in yeast and the contribution of nonconserved sequences

27 November 2018

1 reference

12 December 2020

Cleavage of 5′ splice site and lariat formation are independent of 3′ splice site in yeast mRNA splicing

1 reference

12 December 2020

A quantitative analysis of the effects of 5′ junction and TACTAAC box mutants and mutant combinations on yeast mRNA splicing

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12 December 2020

Some cis- and trans-acting mutants for splicing target pre-mRNA to the cytoplasm

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12 December 2020

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