The widespread regulation of microRNA biogenesis, function and decay (Q28131796)

MicroRNAs: target recognition and regulatory functions

Europe PubMed Central

title

The widespread regulation of microRNA biogenesis, function and decay (English)

0 references

1 reference

3

Witold Filipowicz

0 references

author name string

Jacek Krol

series ordinal

1

0 references

Inga Loedige

series ordinal

2

0 references

language of work or name

English

0 references

publication date

September 2010

0 references

published in

Nature Reviews Genetics

0 references

volume

11

0 references

page(s)

597-610

0 references

issue

9

0 references

cites work

1 reference

Origins and Mechanisms of miRNAs and siRNAs

31 March 2020

1 reference

Mechanisms of miRNA-mediated post-transcriptional regulation in animal cells

31 March 2020

1 reference

Regulation of mRNA translation and stability by microRNAs

31 March 2020

1 reference

Biogenesis of small RNAs in animals

31 March 2020

1 reference

Origin, biogenesis, and activity of plant microRNAs

31 March 2020

1 reference

Regulation of MicroRNA Biogenesis: A miRiad of mechanisms

31 March 2020

1 reference

Transcriptional control of microRNA expression in C. elegans: promoting better understanding

31 March 2020

1 reference

A MicroRNA feedback circuit in midbrain dopamine neurons

31 March 2020

1 reference

MicroRNAs acting in a double-negative feedback loop to control a neuronal cell fate decision

31 March 2020

1 reference

A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands

31 March 2020

1 reference

Functionally distinct regulatory RNAs generated by bidirectional transcription and processing of microRNA loci

31 March 2020

1 reference

Posttranscriptional crossregulation between Drosha and DGCR8.

31 March 2020

1 reference

Post-transcriptional control of DGCR8 expression by the Microprocessor

31 March 2020

1 reference

The Microprocessor complex mediates the genesis of microRNAs

31 March 2020

1 reference

Heme is involved in microRNA processing

31 March 2020

1 reference

TRBP recruits the Dicer complex to Ago2 for microRNA processing and gene silencing

31 March 2020

1 reference

RETRACTED: A TARBP2 mutation in human cancer impairs microRNA processing and DICER1 function

31 March 2020

1 reference

Phosphorylation of the human microRNA-generating complex mediates MAPK/Erk signaling

31 March 2020

1 reference

A search for conserved sequences in coding regions reveals that the let-7 microRNA targets Dicer within its coding sequence

31 March 2020

1 reference

MicroRNAs and cancer epigenetics: a macrorevolution

31 March 2020

1 reference

Autoinhibition of human dicer by its internal helicase domain

31 March 2020

1 reference

Dicer and eIF2c are enriched at postsynaptic densities in adult mouse brain and are modified by neuronal activity in a calpain-dependent manner

31 March 2020

1 reference

Human Dicer preferentially cleaves dsRNAs at their termini without a requirement for ATP

31 March 2020

1 reference

Caspase-dependent conversion of Dicer ribonuclease into a death-promoting deoxyribonuclease.

31 March 2020

1 reference

Mammalian microRNAs: experimental evaluation of novel and previously annotated genes

31 March 2020

1 reference

Structural basis for 5'-nucleotide base-specific recognition of guide RNA by human AGO2

31 March 2020

1 reference

Structural features of microRNA (miRNA) precursors and their relevance to miRNA biogenesis and small interfering RNA/short hairpin RNA design

31 March 2020

1 reference

Tissue-dependent paired expression of miRNAs

31 March 2020

1 reference

Many roads to maturity: microRNA biogenesis pathways and their regulation

31 March 2020

1 reference

Lin28: A microRNA regulator with a macro role

31 March 2020

1 reference

A feedback loop comprising lin-28 and let-7 controls pre-let-7 maturation during neural stem-cell commitment

31 March 2020

1 reference

LIN-28 and the poly(U) polymerase PUP-2 regulate let-7 microRNA processing in Caenorhabditis elegans

31 March 2020

1 reference

Lin28 recruits the TUTase Zcchc11 to inhibit let-7 maturation in mouse embryonic stem cells

31 March 2020

1 reference

Lin28 mediates the terminal uridylation of let-7 precursor MicroRNA

31 March 2020

1 reference

TUT4 in concert with Lin28 suppresses microRNA biogenesis through pre-microRNA uridylation

31 March 2020

1 reference

Zcchc11-dependent uridylation of microRNA directs cytokine expression

31 March 2020

1 reference

Selective blockade of microRNA processing by Lin28

31 March 2020

1 reference

The let-7 family of microRNAs

31 March 2020

1 reference

Lin28 promotes transformation and is associated with advanced human malignancies

31 March 2020

1 reference

DEAD-box RNA helicase subunits of the Drosha complex are required for processing of rRNA and a subset of microRNAs

31 March 2020

1 reference

Modulation of microRNA processing by p53

31 March 2020

1 reference

SMAD proteins control DROSHA-mediated microRNA maturation

31 March 2020

1 reference

The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesis

31 March 2020

1 reference

Regulation of cyclin D1 RNA stability by SNIP1

31 March 2020

1 reference

Nuclear networking fashions pre-messenger RNA and primary microRNA transcripts for function

31 March 2020

1 reference

Ars2 links the nuclear cap-binding complex to RNA interference and cell proliferation

31 March 2020

1 reference

Ars2 regulates both miRNA- and siRNA- dependent silencing and suppresses RNA virus infection in Drosophila

31 March 2020

1 reference

Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana

31 March 2020

1 reference

A splicing-independent function of SF2/ASF in microRNA processing

31 March 2020

1 reference

Posttranscriptional regulation of miRNAs harboring conserved terminal loops.

31 March 2020

1 reference

The RNA-binding protein KSRP promotes the biogenesis of a subset of microRNAs

31 March 2020

1 reference

The RISC subunit Tudor-SN binds to hyper-edited double-stranded RNA and promotes its cleavage

31 March 2020

1 reference

RNA editing of the microRNA-151 precursor blocks cleavage by the Dicer-TRBP complex

31 March 2020

1 reference

Frequency and fate of microRNA editing in human brain

31 March 2020

1 reference

Editing independent effects of ADARs on the miRNA/siRNA pathways

31 March 2020

1 reference

Redirection of silencing targets by adenosine-to-inosine editing of miRNAs

31 March 2020

1 reference

Sorting of Drosophila small silencing RNAs partitions microRNA* strands into the RNA interference pathway

31 March 2020

1 reference

Hierarchical rules for Argonaute loading in Drosophila

31 March 2020

1 reference

Distinct mechanisms for microRNA strand selection by Drosophila Argonautes

31 March 2020

1 reference

Drosophila argonaute1 and argonaute2 employ distinct mechanisms for translational repression.

31 March 2020

1 reference

Essential and overlapping functions for mammalian Argonautes in microRNA silencing

31 March 2020

1 reference

Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing.

31 March 2020

1 reference

A human snoRNA with microRNA-like functions

31 March 2020

1 reference

Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP

31 March 2020

1 reference

A dicer-independent miRNA biogenesis pathway that requires Ago catalysis

31 March 2020

1 reference

A novel miRNA processing pathway independent of Dicer requires Argonaute2 catalytic activity

31 March 2020

1 reference

A Slicer-independent role for Argonaute 2 in hematopoiesis and the microRNA pathway

31 March 2020

1 reference

Importance of translation and nonnucleolytic ago proteins for on-target RNA interference

31 March 2020

1 reference

Dual role for argonautes in microRNA processing and posttranscriptional regulation of microRNA expression.

31 March 2020

1 reference

HSP90 protein stabilizes unloaded argonaute complexes and microscopic P-bodies in human cells

31 March 2020

1 reference

GERp95 belongs to a family of signal-transducing proteins and requires Hsp90 activity for stability and Golgi localization

31 March 2020

1 reference

Prolyl 4-hydroxylation regulates Argonaute 2 stability

31 March 2020

1 reference

The let-7 target gene mouse lin-41 is a stem cell specific E3 ubiquitin ligase for the miRNA pathway protein Ago2

31 March 2020

1 reference

Phosphorylation of Argonaute 2 at serine-387 facilitates its localization to processing bodies

31 March 2020

1 reference

Relief of microRNA-mediated translational repression in human cells subjected to stress

31 March 2020

1 reference

microRNAs: a safeguard against turmoil?

31 March 2020

1 reference

Allosteric regulation of Argonaute proteins by miRNAs.

31 March 2020

1 reference

An mRNA m7G cap binding-like motif within human Ago2 represses translation

31 March 2020

1 reference

GW182 interaction with Argonaute is essential for miRNA-mediated translational repression and mRNA decay

31 March 2020

1 reference

Nucleation, propagation and cleavage of target RNAs in Ago silencing complexes

31 March 2020

1 reference

The GW182 protein family in animal cells: new insights into domains required for miRNA-mediated gene silencing

31 March 2020

1 reference

Identification of GW182 and its novel isoform TNGW1 as translational repressors in Ago2-mediated silencing

31 March 2020

1 reference

A phosphorylated cytoplasmic autoantigen, GW182, associates with a unique population of human mRNAs within novel cytoplasmic speckles

31 March 2020

1 reference

GW182 is critical for the stability of GW bodies expressed during the cell cycle and cell proliferation

31 March 2020

1 reference

Multivesicular bodies associate with components of miRNA effector complexes and modulate miRNA activity

31 March 2020

1 reference

The mechanism of ATP-dependent RNA unwinding by DEAD box proteins

31 March 2020

1 reference

RNA helicase A interacts with RISC in human cells and functions in RISC loading

31 March 2020

1 reference

RISC assembly defects in the Drosophila RNAi mutant armitage.

31 March 2020

1 reference

nhl-2 Modulates microRNA activity in Caenorhabditis elegans

31 March 2020

1 reference

Mei-P26 regulates microRNAs and cell growth in the Drosophila ovarian stem cell lineage

31 March 2020

1 reference

The TRIM-NHL protein TRIM32 activates microRNAs and prevents self-renewal in mouse neural progenitors

31 March 2020

1 reference

Importin 8 is a gene silencing factor that targets argonaute proteins to distinct mRNAs

31 March 2020

1 reference

Hsp90 regulates the function of argonaute 2 and its recruitment to stress granules and P-bodies

31 March 2020

1 reference

In vitro assembly of plant RNA-induced silencing complexes facilitated by molecular chaperone HSP90.

31 March 2020

1 reference

Hsc70/Hsp90 chaperone machinery mediates ATP-dependent RISC loading of small RNA duplexes

31 March 2020

1 reference

RNA-binding protein Dnd1 inhibits microRNA access to target mRNA

31 March 2020

1 reference

Differential regulation of germline mRNAs in soma and germ cells by zebrafish miR-430.

31 March 2020

1 reference

The Caenorhabditis elegans pumilio homolog, puf-9, is required for the 3'UTR-mediated repression of the let-7 microRNA target gene, hbl-1

31 March 2020

1 reference

Comparative analysis of mRNA targets for human PUF-family proteins suggests extensive interaction with the miRNA regulatory system

31 March 2020

1 reference

HuR recruits let-7/RISC to repress c-Myc expression

31 March 2020

1 reference

miR-328 functions as an RNA decoy to modulate hnRNP E2 regulation of mRNA translation in leukemic blasts

31 March 2020

1 reference

AU-rich-element-mediated upregulation of translation by FXR1 and Argonaute 2.

31 March 2020

1 reference

Switching from repression to activation: microRNAs can up-regulate translation

31 March 2020

1 reference

MicroRNA-10a binds the 5'UTR of ribosomal protein mRNAs and enhances their translation

31 March 2020

1 reference

microRNA-122 stimulates translation of hepatitis C virus RNA

31 March 2020

1 reference

Silencing by small RNAs is linked to endosomal trafficking

31 March 2020

1 reference

GERp95, a membrane-associated protein that belongs to a family of proteins involved in stem cell differentiation

31 March 2020

1 reference

Characterization of the interactions between mammalian PAZ PIWI domain proteins and Dicer

31 March 2020

1 reference

Cell signalling by microRNA165/6 directs gene dose-dependent root cell fate.

31 March 2020

1 reference

Cell contact-dependent acquisition of cellular and viral nonautonomously encoded small RNAs

31 March 2020

1 reference

Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs

31 March 2020

1 reference

Specific and potent RNAi in the nucleus of human cells

31 March 2020

1 reference

A multifunctional human Argonaute2-specific monoclonal antibody

31 March 2020

1 reference

CRM1 mediates nuclear-cytoplasmic shuttling of mature microRNAs.

31 March 2020

1 reference

A conserved motif in Argonaute-interacting proteins mediates functional interactions through the Argonaute PIWI domain

31 March 2020

1 reference

Transcriptional control of gene expression by microRNAs

31 March 2020

1 reference

MicroRNA binding sites in Arabidopsis class III HD-ZIP mRNAs are required for methylation of the template chromosome

31 March 2020

1 reference

DNA methylation mediated by a microRNA pathway

31 March 2020

1 reference

MicroRNA-directed transcriptional gene silencing in mammalian cells

31 March 2020

1 reference

Synaptic protein synthesis associated with memory is regulated by the RISC pathway in Drosophila

31 March 2020

1 reference

A coordinated local translational control point at the synapse involving relief from silencing and MOV10 degradation

31 March 2020

1 reference

A brain-specific microRNA regulates dendritic spine development

31 March 2020

1 reference

A functional screen implicates microRNA-138-dependent regulation of the depalmitoylation enzyme APT1 in dendritic spine morphogenesis

31 March 2020

1 reference

Staufen- and FMRP-containing neuronal RNPs are structurally and functionally related to somatic P bodies

31 March 2020

1 reference

Dendrites of mammalian neurons contain specialized P-body-like structures that respond to neuronal activation

31 March 2020

1 reference

Dynamic interaction between P-bodies and transport ribonucleoprotein particles in dendrites of mature hippocampal neurons

31 March 2020

1 reference

Expression of microRNAs and their precursors in synaptic fractions of adult mouse forebrain

31 March 2020

1 reference

Macro role(s) of microRNAs in fragile X syndrome?

31 March 2020

1 reference

Regulation of synaptic structure and function by FMRP-associated microRNAs miR-125b and miR-132

31 March 2020

1 reference

Biochemical and genetic interaction between the fragile X mental retardation protein and the microRNA pathway

31 March 2020

1 reference

Control of stress-dependent cardiac growth and gene expression by a microRNA

31 March 2020

1 reference

Integration of microRNA miR-122 in hepatic circadian gene expression

31 March 2020

1 reference

Characterizing light-regulated retinal microRNAs reveals rapid turnover as a common property of neuronal microRNAs

31 March 2020

1 reference

A hexanucleotide element directs microRNA nuclear import.

31 March 2020

1 reference

Post-transcriptional regulation of miR-27 in murine cytomegalovirus infection

31 March 2020

1 reference

Micro-RNA abundance and stability in human brain: specific alterations in Alzheimer's disease temporal lobe neocortex.

31 March 2020

1 reference

Characterization of small RNAs in Aplysia reveals a role for miR-124 in constraining synaptic plasticity through CREB.

31 March 2020

1 reference

MicroRNA-219 modulates NMDA receptor-mediated neurobehavioral dysfunction

31 March 2020

1 reference

Differential regulation of mature and precursor microRNA expression by NMDA and metabotropic glutamate receptor activation during LTP in the adult dentate gyrus in vivo

31 March 2020

1 reference

Signaling mechanisms linking neuronal activity to gene expression and plasticity of the nervous system

31 March 2020

1 reference

Selective stabilization of mammalian microRNAs by 3' adenylation mediated by the cytoplasmic poly(A) polymerase GLD-2.

31 March 2020

1 reference

Adenylation of plant miRNAs.

31 March 2020

1 reference

Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis.

31 March 2020

1 reference

Degradation of microRNAs by a family of exoribonucleases in Arabidopsis

31 March 2020

1 reference

Active turnover modulates mature microRNA activity in Caenorhabditis elegans

31 March 2020

1 reference

Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps

31 March 2020

1 reference

Widespread shortening of 3'UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells

31 March 2020

1 reference

Proliferating cells express mRNAs with shortened 3' untranslated regions and fewer microRNA target sites

31 March 2020

1 reference

Multiple independent domains of dGW182 function in miRNA-mediated repression in Drosophila

31 March 2020

1 reference

Chromatin structure analyses identify miRNA promoters

31 March 2020

1 reference

Features of mammalian microRNA promoters emerge from polymerase II chromatin immunoprecipitation data

31 March 2020

1 reference

c-Myc-regulated microRNAs modulate E2F1 expression

31 March 2020

1 reference

miR-9, a MYC/MYCN-activated microRNA, regulates E-cadherin and cancer metastasis

31 March 2020

1 reference

Widespread microRNA repression by Myc contributes to tumorigenesis

31 March 2020

1 reference

A microRNA component of the p53 tumour suppressor network

31 March 2020

1 reference

Reciprocal actions of REST and a microRNA promote neuronal identity

31 March 2020

1 reference

P bodies: at the crossroads of post-transcriptional pathways

31 March 2020

1 reference

The control of mRNA decapping and P-body formation.

31 March 2020

1 reference

P bodies and the control of mRNA translation and degradation

31 March 2020

1 reference

Translation repression in human cells by microRNA-induced gene silencing requires RCK/p54

31 March 2020

1 reference

P-body formation is a consequence, not the cause, of RNA-mediated gene silencing

31 March 2020

1 reference

Formation of GW bodies is a consequence of microRNA genesis

31 March 2020

1 reference

Derepression of microRNA-mediated protein translation inhibition by apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3G (APOBEC3G) and its family members

31 March 2020

1 reference

MicroRNA-dependent localization of targeted mRNAs to mammalian P-bodies

31 March 2020

1 reference

Inhibition of translational initiation by Let-7 MicroRNA in human cells

31 March 2020

1 reference

Cellular microRNA and P bodies modulate host-HIV-1 interactions

31 March 2020

1 reference

MicroRNA activity is suppressed in mouse oocytes

31 March 2020

1 reference

MicroRNA function is globally suppressed in mouse oocytes and early embryos

31 March 2020

1 reference

P-body loss is concomitant with formation of a messenger RNA storage domain in mouse oocytes

31 March 2020

1 reference

Dcp1-bodies in mouse oocytes

31 March 2020

1 reference

Stress granules and processing bodies are dynamically linked sites of mRNP remodeling

31 March 2020

1 reference

The NF90-NF45 complex functions as a negative regulator in the microRNA processing pathway

31 March 2020

1 reference

A subfamily of RNA-binding DEAD-box proteins acts as an estrogen receptor alpha coactivator through the N-terminal activation domain (AF-1) with an RNA coactivator, SRA

31 March 2020

1 reference

Maturation of microRNA is hormonally regulated by a nuclear receptor

31 March 2020

1 reference

DNA methylation regulates MicroRNA expression

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20661255

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NRG2843

1 reference

Consolidated OpenCitations Corpus – April 2017

Dimensions Publication ID

272344

1028796698

0 references

272344

1 reference

Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

1 reference