Modeller: generation and refinement of homology-based protein structure models (Q28236254)

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Knowledge-based prediction of protein structures and the design of novel molecules

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Knowledge-based model building of proteins: concepts and examples

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Knowledge-Based Protein Modeling

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Advances in comparative protein-structure modelling

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Comparative protein structure modeling of genes and genomes

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

A surprising simplicity to protein folding.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Protein structure modeling for structural genomics.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

An approach to improving multiple alignments of protein sequences using predicted secondary structure

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

1 reference

7 January 2021

The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1999.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

One thousand families for the molecular biologist

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

SCOP: a Structural Classification of Proteins database.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Protein folds and families: sequence and structure alignments

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

The CATH Dictionary of Homologous Superfamilies (DHS): a consensus approach for identifying distant structural homologues.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Mapping the protein universe

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Structural genomics: beyond the human genome project

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Tools for comparative protein structure modeling and analysis

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Comparative protein modelling by satisfaction of spatial restraints

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Derivation of rules for comparative protein modeling from a database of protein structure alignments

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Modeling of loops in protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Issues in searching molecular sequence databases

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Effective protein sequence comparison

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

A unified statistical framework for sequence comparison and structure comparison

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Hidden Markov models in computational biology. Applications to protein modeling

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

1 reference

7 January 2021

Hidden Markov models for detecting remote protein homologies

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

A Method to Identify Protein Sequences That Fold into a Known Three-Dimensional Structure

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

A new approach to protein fold recognition

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Topology fingerprint approach to the inverse protein folding problem

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Threading thrills and threats

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Perspectives in protein-fold recognition

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

A distance-dependent atomic knowledge-based potential for improved protein structure selection.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Meeting review: the Second meeting on the Critical Assessment of Techniques for Protein Structure Prediction (CASP2), Asilomar, California, December 13-16, 1996.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Evaluation of comparative protein modeling by MODELLER

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Recognition of errors in three-dimensional structures of proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Core histones of the amitochondriate protist, Giardia lamblia.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Large-scale protein structure modeling of the Saccharomyces cerevisiae genome

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

A sequence alignment algorithm with an arbitrary gap penalty function.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Pairwise sequence alignment below the twilight zone

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Improving the quality of twilight-zone alignments

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Large-scale comparison of protein sequence alignment algorithms with structure alignments.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Comparative model-building of the mammalian serine proteases

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

A 3D building blocks approach to analyzing and predicting structure of proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Modelling the polypeptide backbone with 'spare parts' from known protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Accurate modeling of protein conformation by automatic segment matching

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

A new method for building protein conformations from sequence alignments with homologues of known structure

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Prediction of the three-dimensional structures of the biotinylated domain from yeast pyruvate carboxylase and of the lipoylated H-protein from the pea leaf glycine cleavage system: a new automated method for the prediction of protein tertiary struct

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Homology modelling by distance geometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

All-atom empirical potential for molecular modeling and dynamics studies of proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Generalized comparative modeling (GENECOMP): a combination of sequence comparison, threading, and lattice modeling for protein structure prediction and refinement.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Reliability of assessment of protein structure prediction methods.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Comparison of systematic search and database methods for constructing segments of protein structure

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Assessment of protein models with three-dimensional profiles

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

PROCHECK: a program to check the stereochemical quality of protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Errors in protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Crystal structure of the delta' subunit of the clamp-loader complex of E. coli DNA polymerase III

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Comparative protein structure modeling by iterative alignment, model building and model assessment

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

Convergent evolution of Trichomonas vaginalis lactate dehydrogenase from malate dehydrogenase

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

The PIR-International Protein Sequence Database

1 reference

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7 January 2021

A general method applicable to the search for similarities in the amino acid sequence of two proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

1H, 13C, 15N resonance assignments and fold verification of a circular permuted variant of the potent HIV-inactivating protein cyanovirin-N

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2803%2974020-8

7 January 2021

10.1016/S0076-6879(03)74020-8

Identifiers

DOI

1 reference

Consolidated OpenCitations Corpus – April 2017

111114

111114

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Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

1 reference