Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine (Q28281009)

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20 February 2020

title

Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine (English)

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20 February 2020

1

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20 February 2020

Jan J Zylicz

3

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20 February 2020

Azim Surani

7

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20 February 2020

author name string

Roopsha Sengupta

2

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20 February 2020

Kazuhiro Murakami

4

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20 February 2020

Caroline Lee

5

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20 February 2020

Thomas A Down

6

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20 February 2020

language of work or name

English

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publication date

6 December 2012

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20 February 2020

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20 February 2020

volume

339

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20 February 2020

issue

6118

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20 February 2020

page(s)

448-452

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Reconstitution of the mouse germ cell specification pathway in culture by pluripotent stem cells

20 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Thymine DNA glycosylase is essential for active DNA demethylation by linked deamination-base excision repair

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Chromatin dynamics during epigenetic reprogramming in the mouse germ line

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Proliferation and migration of primordial germ cells during compensatory growth in mouse embryos

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

DNA methylation is a primary mechanism for silencing postmigratory primordial germ cell genes in both germ cell and somatic cell lineages

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Promoter DNA methylation couples genome-defence mechanisms to epigenetic reprogramming in the mouse germline

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Parallel mechanisms of epigenetic reprogramming in the germline

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Tet1 is dispensable for maintaining pluripotency and its loss is compatible with embryonic and postnatal development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Dynamic CpG island methylation landscape in oocytes and preimplantation embryos

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Intracisternal A particle genes: Distribution in the mouse genome, active subtypes, and potential roles as species-specific mediators of susceptibility to cancer

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Complex genome-wide transcription dynamics orchestrated by Blimp1 for the specification of the germ cell lineage in mice

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Genetic and epigenetic regulators of pluripotency

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Targets and dynamics of promoter DNA methylation during early mouse development

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847602

Epigenetic reprogramming in mouse primordial germ cells

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23223451

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1126/SCIENCE.1229277

2 references

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20 February 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23223451%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

PubMed publication ID

23223451

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23223451%20AND%20SRC:MED&resulttype=core&format=json