Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs (Q28297634)

4

object named as

David P Bartel

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author name string

Joshua E Babiarz

1

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J Graham Ruby

2

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Yangming Wang

An endogenous small interfering RNA pathway in Drosophila

3

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language of work or name

English

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publication date

15 October 2008

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published in

Genes & Development

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volume

22

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issue

20

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page(s)

2773-85

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cites work

1 reference

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Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes

20 March 2017

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Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells

20 March 2017

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Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

20 March 2017

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20 March 2017

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Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs

20 March 2017

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The expanding RNA polymerase III transcriptome

20 March 2017

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Mammalian mirtron genes

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Intronic microRNA precursors that bypass Drosha processing

20 March 2017

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Molecular basis for the recognition of primary microRNAs by the Drosha-DGCR8 complex

20 March 2017

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A human, ATP-independent, RISC assembly machine fueled by pre-miRNA

20 March 2017

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Genome sequencing in microfabricated high-density picolitre reactors

20 March 2017

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The RNaseIII enzyme Dicer is required for morphogenesis but not patterning of the vertebrate limb

20 March 2017

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Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

20 March 2017

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NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

20 March 2017

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The human DiGeorge syndrome critical region gene 8 and Its D. melanogaster homolog are required for miRNA biogenesis

20 March 2017

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The Drosha-DGCR8 complex in primary microRNA processing

20 March 2017

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Processing of primary microRNAs by the Microprocessor complex

20 March 2017

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The Microprocessor complex mediates the genesis of microRNAs

20 March 2017

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tRNA Maturation: RNA Polymerization without a Nucleic Acid Template

20 March 2017

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MicroRNAs: genomics, biogenesis, mechanism, and function

20 March 2017

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The nuclear RNase III Drosha initiates microRNA processing

20 March 2017

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Embryonic stem cell-specific MicroRNAs

20 March 2017

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The microRNAs of Caenorhabditis elegans

20 March 2017

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The UCSC Genome Browser Database

20 March 2017

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Initial sequencing and comparative analysis of the mouse genome

20 March 2017

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BLAT—The BLAST-Like Alignment Tool

20 March 2017

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Specific double-stranded RNA interference in undifferentiated mouse embryonic stem cells

20 March 2017

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Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells

20 March 2017

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How cells respond to interferons

20 March 2017

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Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes

20 March 2017

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Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing

20 March 2017

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Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals

20 March 2017

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The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila

6 April 2017

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DGCR8 is essential for microRNA biogenesis and silencing of embryonic stem cell self-renewal

7 April 2017

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Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans

7 April 2017

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MicroRNAs and other tiny endogenous RNAs in C. elegans

7 April 2017

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Repbase update: a database and an electronic journal of repetitive elements

7 April 2017

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Human embryonic stem cells express a unique set of microRNAs

7 April 2017

1 reference

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Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells

7 April 2017

1 reference

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The Drosophila hairpin RNA pathway generates endogenous short interfering RNAs

29 September 2017

1 reference

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Small RNAs: keeping stem cells in line

29 September 2017

1 reference

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Origin, evolution, and biological role of miRNA cluster in DLK-DIO3 genomic region in placental mammals

29 September 2017

1 reference

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RNA sequence analysis defines Dicer's role in mouse embryonic stem cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

The function of RNAi in plant development.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

Nonrestrictive developmental regulation of microRNA gene expression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

Reprogramming efficiency following somatic cell nuclear transfer is influenced by the differentiation and methylation state of the donor nucleus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

RNAi-directed assembly of heterochromatin in fission yeast

29 September 2017

1 reference

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Dicing and slicing: the core machinery of the RNA interference pathway

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

Characterization of Dicer-deficient murine embryonic stem cells.

29 September 2017

1 reference

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The silent revolution: RNA interference as basic biology, research tool, and therapeutic

29 September 2017

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Unlocking the potential of the human genome with RNA interference

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

Photocleavable fluorescent nucleotides for DNA sequencing on a chip constructed by site-specific coupling chemistry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

RNA interference: the new somatic cell genetics?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

Effective expression of small interfering RNA in human cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

Expression of small interfering RNAs targeted against HIV-1 rev transcripts in human cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

Specific interference with gene function by double-stranded RNA in early mouse development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

Two classes of endogenous small RNAs in Tetrahymena thermophila

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2569885

27 November 2018

Identifiers

DOI

10.1101/GAD.1705308

1 reference

release_tuvkgwyuwfg6pjxjp7dn3w4hgi

235899

Fatcat ID

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235899

1 reference

1 reference

1 reference