Refinement of light-responsive transcript lists using rice oligonucleotide arrays: evaluation of gene-redundancy (Q28473725)

David Rocke

18

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Patrick S Schnable

20

Patrick S Schnable

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Gynheung An

21

Gynheung An

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Pamela Ronald

23

Pamela C Ronald

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author name string

Ki-Hong Jung

1

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Christopher Dardick

2

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Peijian Cao

4

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Jirapa Phetsom

5

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Patrick Canlas

6

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Young-Su Seo

7

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Michael Shultz

8

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Shu Ouyang

9

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Qiaoping Yuan

10

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Bryan C Frank

11

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Eugene Ly

12

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Li Zheng

13

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Yi Jia

14

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An-Ping Hsia

15

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Kyungsook An

16

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Hui-Hsien Chou

17

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Geun Cheol Lee

19

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C Robin Buell

Creative Commons CC0 License

22

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language of work or name

English

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publication date

6 October 2008

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published in

PLOS One

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volume

3

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issue

10

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page(s)

e3337

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copyright license

start time

6 October 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

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cites work

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Genome-wide gene expression profiling reveals conserved and novel molecular functions of the stigma in rice

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Global analysis of alternative splicing during T-cell activation

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Analyzing gene expression data in terms of gene sets: methodological issues

29 September 2017

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F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress

29 September 2017

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How many genes are there in plants (... and why are they there)?

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice

2 June 2018

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Transformation of rice mediated by Agrobacterium tumefaciens

2 June 2018

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Photorespiration and light act in concert to regulate the expression of the nuclear gene for chloroplast glutamine synthetase

2 June 2018

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Comparative analysis of the receptor-like kinase family in Arabidopsis and rice

2 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Molecular analysis of Arabidopsis endosperm and embryo promoter trap lines: reporter-gene expression can result from T-DNA insertions in antisense orientation, in introns and in intergenic regions, in addition to sense insertion at the 5' end of gen

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Induction of a unique gene expression profile in primary human hepatocytes by hepatitis C virus core, NS3 and NS5A proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Rice Undeveloped Tapetum1 is a major regulator of early tapetum development

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Comparative transcriptional profiling of two contrasting rice genotypes under salinity stress during the vegetative growth stage

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Conservation and divergence of light-regulated genome expression patterns during seedling development in rice and Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Population genetic variation in genome-wide gene expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Targeted destabilization of HY5 during light-regulated development of Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Aluminum induces oxidative stress genes in Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Two P-type ATPases are required for copper delivery in Arabidopsis thaliana chloroplasts

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Wax-deficient anther1 is involved in cuticle and wax production in rice anther walls and is required for pollen development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Gene expression profiling of the tetrapyrrole metabolic pathway in Arabidopsis with a mini-array system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

D-GLYCERATE 3-KINASE, the last unknown enzyme in the photorespiratory cycle in Arabidopsis, belongs to a novel kinase family

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

RNA silencing of single and multiple members in a gene family of rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Peroxisomal alanine : glyoxylate aminotransferase (AGT1) is a photorespiratory enzyme with multiple substrates in Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Identification of photorespiratory glutamate:glyoxylate aminotransferase (GGAT) gene in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Enhanced Thermostability of Arabidopsis Rubisco activase improves photosynthesis and growth rates under moderate heat stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Involvement of a Ca(2+)-dependent protein kinase component downstream to the gibberellin-binding phosphoprotein, RuBisCO activase, in rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Rice proteomics: a step toward functional analysis of the rice genome

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Protein-protein interactions of tandem affinity purification-tagged protein kinases in rice

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003337

Rice XA21 binding protein 3 is a ubiquitin ligase required for full Xa21-mediated disease resistance

21 January 2018

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Picky: oligo microarray design for large genomes.

21 January 2018

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Reduction of autofluorescence on DNA microarrays and slide surfaces by treatment with sodium borohydride

21 January 2018

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Gene expression profiling of potato responses to cold, heat, and salt stress

21 January 2018

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Light-dependent changes in ribulose bisphosphate carboxylase activase activity in leaves

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12 December 2020

Rice WRKY45 plays a crucial role in benzothiadiazole-inducible blast resistance

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12 December 2020

Characterization of a rice chlorophyll-deficient mutant using the T-DNA gene-trap system

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12 December 2020

Control of Photosynthetic Sucrose Synthesis by Fructose 2,6-Bisphosphate : II. Partitioning between Sucrose and Starch

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12 December 2020

Induction of acclimative proteolysis of the light-harvesting chlorophyll a/b protein of photosystem II in response to elevated light intensities

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12 December 2020

10.1371/JOURNAL.PONE.0003337

Identifiers

DOI

1 reference

ADS bibcode

2008PLoSO...3.3337J

0 references

1 reference

1 reference

PubMed publication ID

18836531

1 reference