Transcriptome analysis of cytokinin response in tomato leaves (Q28485300)

2

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Ingrid E Lindquist

3

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Connor T Cameron

4

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Joann Mudge

5

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Aaron M Rashotte

Creative Commons Attribution 4.0 International

6

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language of work or name

English

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publication date

2013

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published in

PLOS One

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volume

8

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issue

1

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page(s)

e55090

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copyright license

start time

25 January 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

DESeq2

object named as

DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

MIRA

object named as

MIRA

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Tissue- and cell-type specific transcriptome profiling of expanding tomato fruit provides insights into metabolic and regulatory specialization and cuticle formation

29 September 2017

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Cytokinin-mediated source/sink modifications improve drought tolerance and increase grain yield in rice under water-stress

29 September 2017

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Control of root architecture and nodulation by the LATD/NIP transporter

29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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A conserved molecular framework for compound leaf development

29 September 2017

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The Arabidopsis BEL1-LIKE HOMEODOMAIN proteins SAW1 and SAW2 act redundantly to regulate KNOX expression spatially in leaf margins

29 September 2017

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Mechanisms of cross talk between gibberellin and other hormones

29 September 2017

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Arabidopsis JAGGED LATERAL ORGANS is expressed in boundaries and coordinates KNOX and PIN activity.

29 September 2017

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Meristem maintenance and compound-leaf patterning utilize common genetic mechanisms in tomato

29 September 2017

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29 September 2017

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A subset of Arabidopsis AP2 transcription factors mediates cytokinin responses in concert with a two-component pathway

29 September 2017

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Arabidopsis KNOXI proteins activate cytokinin biosynthesis

29 September 2017

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29 September 2017

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29 September 2017

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The Arabidopsis cytochrome P450 CYP707A encodes ABA 8'-hydroxylases: key enzymes in ABA catabolism

29 September 2017

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Expression of cytokinin biosynthetic isopentenyltransferase genes in Arabidopsis: tissue specificity and regulation by auxin, cytokinin, and nitrate

29 September 2017

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29 September 2017

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Expression profiling of cytokinin action in Arabidopsis

29 September 2017

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Structure and function of cytokinin oxidase/dehydrogenase genes of maize, rice, Arabidopsis and other species.

29 September 2017

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The lateral organ boundaries gene defines a novel, plant-specific gene family

29 September 2017

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tRNA is the source of low-level trans-zeatin production in Methylobacterium spp.

29 September 2017

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Cytokinins. New insights into a classic phytohormone

29 September 2017

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CYTOKININ METABOLISM AND ACTION.

29 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3555872

Expression of a gibberellin 2-oxidase gene around the shoot apex is related to phase transition in rice

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3555872

Roles of glucuronidation and UDP-glucuronosyltransferases in xenobiotic bioactivation reactions

29 September 2017

1 reference

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Phylogenetic analysis of the UDP-glycosyltransferase multigene family of Arabidopsis thaliana.

29 September 2017

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A new family of high-affinity transporters for adenine, cytosine, and purine derivatives in Arabidopsis

29 September 2017

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Structural and functional studies of UDP-glucuronosyltransferases

29 September 2017

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Increased steady state mRNA levels of the STM and KNAT1 homeobox genes in cytokinin overproducing Arabidopsis thaliana indicate a role for cytokinins in the shoot apical meristem

29 September 2017

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Recessive and dominant mutations in the ethylene biosynthetic gene ACS5 of Arabidopsis confer cytokinin insensitivity and ethylene overproduction, respectively.

29 September 2017

1 reference

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The GH3 family in plants: genome wide analysis in rice and evolutionary history based on EST analysis

29 September 2017

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Immediate-early and delayed cytokinin response genes of Arabidopsis thaliana identified by genome-wide expression profiling reveal novel cytokinin-sensitive processes and suggest cytokinin action through transcriptional cascades

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3555872

Expression of Arabidopsis response regulator homologs is induced by cytokinins and nitrate.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3555872

Arabidopsis cytokinin receptor mutants reveal functions in shoot growth, leaf senescence, seed size, germination, root development, and cytokinin metabolism

2 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

Cytokinin regulates compound leaf development in tomato.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

Advances in cytokinin signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

Type-A Arabidopsis response regulators are partially redundant negative regulators of cytokinin signaling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

Overexpression of a type-A response regulator alters rice morphology and cytokinin metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

Type B response regulators of Arabidopsis play key roles in cytokinin signaling and plant development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

The transcriptional repressor ARR1-SRDX suppresses pleiotropic cytokinin activities in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

Combined transcription factor profiling, microarray analysis and metabolite profiling reveals the transcriptional control of metabolic shifts occurring during tomato fruit development.

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

The CCAAT binding factor can mediate interactions between CONSTANS-like proteins and DNA.

21 January 2018

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CONSTANS and the CCAAT box binding complex share a functionally important domain and interact to regulate flowering of Arabidopsis

21 January 2018

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Altered life cycle in Arabidopsis plants expressing PsUGT1, a UDP-glucuronosyltransferase-encoding gene from pea.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

The oxylipin signal jasmonic acid is activated by an enzyme that conjugates it to isoleucine in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

The role of JAR1 in Jasmonoyl-L: -isoleucine production during Arabidopsis wound response.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

A Role for Cytokinins in De-Etiolation in Arabidopsis (det Mutants Have an Altered Response to Cytokinins).

21 January 2018

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Cytokinin effects on tetrapyrrole biosynthesis and photosynthetic activity in barley seedlings

21 January 2018

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The PLASTID DIVISION1 and 2 components of the chloroplast division machinery determine the rate of chloroplast division in land plant cell differentiation.

21 January 2018

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A link between cytokinin and ASL9 (ASYMMETRIC LEAVES 2 LIKE 9) that belongs to the AS2/LOB (LATERAL ORGAN BOUNDARIES) family genes in Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

Cytokinin action is coupled to ethylene in its effects on the inhibition of root and hypocotyl elongation in Arabidopsis thaliana seedlings.

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

Cytokinin antagonizes ABA suppression to seed germination of Arabidopsis by downregulating ABI5 expression.

21 January 2018

1 reference

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The eto1, eto2, and eto3 mutations and cytokinin treatment increase ethylene biosynthesis in Arabidopsis by increasing the stability of ACS protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

Cytokinin modulates endocytic trafficking of PIN1 auxin efflux carrier to control plant organogenesis.

21 January 2018

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Transport of cytokinins mediated by purine transporters of the PUP family expressed in phloem, hydathodes, and pollen of Arabidopsis

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055090

A transcriptome-based characterization of habituation in plant tissue culture.

21 January 2018

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JAZ repressor proteins are targets of the SCFCOI1 complex during jasmonate signalling

21 January 2018

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Ripening-regulated susceptibility of tomato fruit to Botrytis cinerea requires NOR but not RIN or ethylene

21 January 2018

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Comprehensive transcriptome profiling in tomato reveals a role for glycosyltransferase in Mi-mediated nematode resistance

27 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3555872

Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry

27 November 2018

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Identification of a tRNA isopentenyltransferase gene from Arabidopsis thaliana

27 November 2018

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Characterization of the response of the Arabidopsis response regulator gene family to cytokinin.

27 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3555872

Cytokinin stimulates and abscisic acid inhibits greening of etiolated Lupinus luteus cotyledons by affecting the expression of the light-sensitive protochlorophyllide oxidoreductase

27 November 2018

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12 December 2020

A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis

1 reference

12 December 2020

Transfer RNA Is the Source of Extracellular Isopentenyladenine in a Ti-Plasmidless Strain of Agrobacterium tumefaciens

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12 December 2020

Metabolism of Benzyladenine is Impaired in a Mutant of Arabidopsis thaliana Lacking Adenine Phosphoribosyltransferase Activity

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12 December 2020

10.1371/JOURNAL.PONE.0055090

Identifiers

DOI

1 reference

ADS bibcode

2013PLoSO...855090S

0 references

1 reference

1 reference

PubMed publication ID

23372818

1 reference