WBSA: web service for bisulfite sequencing data analysis (Q28539330)

2

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Yanqing Wang

3

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Jianfeng Wang

4

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Caixia Yu

5

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Xu Chen

6

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Junwei Zhu

7

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Jiangwei Yan

8

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Wenming Zhao

9

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Rujiao Li

Creative Commons Attribution 4.0 International

10

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language of work or name

English

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publication date

2014

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published in

PLOS One

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volume

9

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issue

1

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page(s)

e86707

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copyright license

start time

30 January 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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1 reference

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QDMR: a quantitative method for identification of differentially methylated regions by entropy

19 March 2017

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Human DNA methylomes at base resolution show widespread epigenomic differences

19 March 2017

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Fast and accurate short read alignment with Burrows-Wheeler transform

19 March 2017

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

19 March 2017

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A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis

19 March 2017

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Genome-scale DNA methylation maps of pluripotent and differentiated cells

19 March 2017

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The epigenomics of cancer

19 March 2017

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WebLogo: A Sequence Logo Generator

19 March 2017

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Cancer epigenomics: DNA methylomes and histone-modification maps

19 March 2017

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DNA methylation and human disease

7 April 2017

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RRBS-analyser: a comprehensive web server for reduced representation bisulfite sequencing data analysis.

7 April 2017

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COHCAP: an integrative genomic pipeline for single-nucleotide resolution DNA methylation analysis

29 September 2017

1 reference

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GBSA: a comprehensive software for analysing whole genome bisulfite sequencing data.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3907392

methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles

29 September 2017

1 reference

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wapRNA: a web-based application for the processing of RNA sequences

29 September 2017

1 reference

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Chromosome-wide DNA methylation analysis predicts human tissue-specific X inactivation

29 September 2017

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Aligning short sequencing reads with Bowtie

29 September 2017

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Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications.

29 September 2017

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Quantitative comparison of genome-wide DNA methylation mapping technologies.

29 September 2017

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BS Seeker: precise mapping for bisulfite sequencing

29 September 2017

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Genomic imprinting: the influence of differential methylation in the two sexes.

29 September 2017

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MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome

29 September 2017

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Updates to the RMAP short-read mapping software

29 September 2017

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BSMAP: whole genome bisulfite sequence MAPping program

29 September 2017

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Methyl-DNA immunoprecipitation (MeDIP): hunting down the DNA methylome.

29 September 2017

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SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing.

29 September 2017

1 reference

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Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.

3 June 2018

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CyMATE: a new tool for methylation analysis of plant genomic DNA after bisulphite sequencing.

3 June 2018

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Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086707

CpG PatternFinder: a Windows-based utility program for easy and rapid identification of the CpG methylation status of DNA.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086707

10.1371/JOURNAL.PONE.0086707

21 January 2018

Identifiers

DOI

1 reference

ADS bibcode

2014PLoSO...986707L

0 references

1 reference

1 reference

PubMed publication ID

24497972

1 reference