IFI16 Preferentially Binds to DNA with Quadruplex Structure and Enhances DNA Quadruplex Formation (Q28550195)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280708%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

title

IFI16 Preferentially Binds to DNA with Quadruplex Structure and Enhances DNA Quadruplex Formation (English)

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13 March 2020

1

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13 March 2020

Petr Müller

7

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13 March 2020

Vaclav Brazda

9

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8

Borivoj Vojtesek

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13 March 2020

author name string

Jan Coufal

2

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13 March 2020

Iva Kejnovská

3

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13 March 2020

Eva B Jagelská

4

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13 March 2020

Miroslav Fojta

5

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13 March 2020

Petra Dvořáková

6

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13 March 2020

language of work or name

English

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publication date

9 June 2016

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13 March 2020

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13 March 2020

volume

11

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issue

6

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13 March 2020

page(s)

e0157156

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Creative Commons Attribution 4.0 International

13 March 2020

copyright license

start time

9 June 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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19 March 2017

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Role of IFI 16, a member of the interferon-inducible p200-protein family, in prostate epithelial cellular senescence

19 March 2017

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Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription

19 March 2017

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19 March 2017

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DNA tetraplex formation in the control region of c-myc

19 March 2017

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19 March 2017

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IFI 16 gene encodes a nuclear protein whose expression is induced by interferons in human myeloid leukaemia cell lines

19 March 2017

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Nucleolin stabilizes G-quadruplex structures folded by the LTR promoter and silences HIV-1 viral transcription.

19 March 2017

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Interferon γ-inducible protein (IFI) 16 transcriptionally regulates type i interferons and other interferon-stimulated genes and controls the interferon response to both DNA and RNA viruses

29 September 2017

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U3 region in the HIV-1 genome adopts a G-quadruplex structure in its RNA and DNA sequence

29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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MAZ-binding G4-decoy with locked nucleic acid and twisted intercalating nucleic acid modifications suppresses KRAS in pancreatic cancer cells and delays tumor growth in mice

29 September 2017

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Herpes simplex virus 1 infection induces activation and subsequent inhibition of the IFI16 and NLRP3 inflammasomes

29 September 2017

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Kaposi's sarcoma-associated herpesvirus latency in endothelial and B cells activates gamma interferon-inducible protein 16-mediated inflammasomes.

29 September 2017

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29 September 2017

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29 September 2017

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The guanine-quadruplex structure in the human c-myc gene's promoter is converted into B-DNA form by the human poly(ADP-ribose)polymerase-1.

29 September 2017

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29 September 2017

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Acetylation modulates cellular distribution and DNA sensing ability of interferon-inducible protein IFI16.

29 September 2017

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Preferential binding of IFI16 protein to cruciform structure and superhelical DNA.

29 September 2017

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Cruciform structures are a common DNA feature important for regulating biological processes.

29 September 2017

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Identification of the DNA-Binding Domains of Human Replication Protein A That Recognize G-Quadruplex DNA

29 September 2017

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Stabilization of a G-Quadruplex from Unfolding by Replication Protein A Using Potassium and the Porphyrin TMPyP4

29 September 2017

1 reference

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G-quadruplex formation at the 3' end of telomere DNA inhibits its extension by telomerase, polymerase and unwinding by helicase

29 September 2017

1 reference

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Interferon-inducible IFI16, a negative regulator of cell growth, down-regulates expression of human telomerase reverse transcriptase (hTERT) gene.

29 September 2017

1 reference

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Identification and characterization of nucleolin as a c-myc G-quadruplex-binding protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900677

IFI16 and NM23 bind to a common DNA fragment both in the P53 and the cMYC gene promoters

29 September 2017

1 reference

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RPA nucleic acid-binding properties of IFI16-HIN200.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900677

Structure of the biologically relevant G-quadruplex in the c-MYC promoter

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900677

An intramolecular G-quadruplex structure with mixed parallel/antiparallel G-strands formed in the human BCL-2 promoter region in solution

29 September 2017

1 reference

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FoldIndex: a simple tool to predict whether a given protein sequence is intrinsically unfolded

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900677

Evidence for interstrand quadruplex formation in the dimerization of human immunodeficiency virus 1 genomic RNA

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900677

Interferon action: nucleolar and nucleoplasmic localization of the interferon-inducible 72-kD protein that is encoded by the Ifi 204 gene from the gene 200 cluster

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900677

Polymorphism in IFI16 affects CD4(+) T-cell counts in HIV-1 infection

29 September 2017

1 reference

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Innate DNA sensing is impaired in HIV patients and IFI16 expression correlates with chronic immune activation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900677

Human papillomavirus G-quadruplexes

3 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900677

Constitutive interferon-inducible protein 16-inflammasome activation during Epstein-Barr virus latency I, II, and III in B and epithelial cells

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900677

Polymorphism of human telomeric quadruplex structure controlled by DNA concentration: a Raman study

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900677

Arrangements of human telomere DNA quadruplex in physiologically relevant K+ solutions

3 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900677

QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences

3 June 2018

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Putative DNA quadruplex formation within the human c-kit oncogene

3 June 2018

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The Interferon Inducible Autoantigen, IFI 16: Localization to the Nucleolus and Identification of a DNA-Binding Domain

3 June 2018

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Solution structure of the biologically relevant G-quadruplex element in the human c-MYC promoter. Implications for G-quadruplex stabilization

21 January 2018

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Structural insight into the h TERT intron 6 sequence d(GGGGTGAAAGGGG) from 1H-NMR study

21 January 2018

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Redistribution of the nuclear protein IFI16 into the cytoplasm of ultraviolet B-exposed keratinocytes as a mechanism of autoantigen processing

21 January 2018

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Absorption and circular dichroism spectroscopy of nucleic acid duplexes and triplexes

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27280708

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0157156

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280708%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

ADS bibcode

2016PLoSO..1157156H

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280708%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

PubMed publication ID

27280708

2 references