Phaser.MRage: automated molecular replacement (Q28661765)

PubMed

19 September 2019

amino acid replacement

1 reference

4 August 2020

1 reference

10 November 2020

computational biology

1 reference

8 April 2021

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24189240%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Paul D. Adams

series ordinal

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24189240%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Randy Read

series ordinal

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24189240%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

3

Airlie J McCoy

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24189240%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

2

Nathaniel Echols

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24189240%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

1

Gábor Bunkóczi

1 reference

4 June 2020

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24189240%20AND%20SRC:MED&resulttype=core&format=json

Acta Crystallographica Section D: Biological Crystallography

language of work or name

English

0 references

publication date

November 2013

0 references

1 November 2013

4 references

19 September 2019

4 August 2020

10 November 2020

8 April 2021

5 references

19 September 2019

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24189240%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

4 August 2020

10 November 2020

8 April 2021

69

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24189240%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

issue

Pt 11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24189240%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

page(s)

2276-2286

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24189240%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution

4 June 2020

copyright license

4 references

19 September 2019

4 August 2020

10 November 2020

8 April 2021

0 references

Improved molecular replacement by density- and energy-guided protein structure optimization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Overview of the CCP4 suite and current developments

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Protein structure determination by exhaustive search of Protein Data Bank derived databases

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

PHENIX: a comprehensive Python-based system for macromolecular structure solution

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Molecular replacement with MOLREP

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Phasercrystallographic software

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

BALBES: a molecular-replacement pipeline

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Clustal W and Clustal X version 2.0

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

FFAS03: a server for profile--profile sequence alignments

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

The HHpred interactive server for protein homology detection and structure prediction

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Likelihood-enhanced fast translation functions

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

MUSCLE: multiple sequence alignment with high accuracy and high throughput

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Announcing the worldwide Protein Data Bank

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Crystal structure of a lysine biosynthesis enzyme, LysX, from Thermus thermophilus HB8

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Atomic resolution structures of trypsin provide insight into structural radiation damage

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Structure of the shiga-like toxin I B-pentamer complexed with an analogue of its receptor Gb3

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

The relation between the divergence of sequence and structure in proteins

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Basic local alignment search tool

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Crystal structure of the cell-binding B oligomer of verotoxin-1 from E. coli

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Presenting your structures: the CCP4mg molecular-graphics software

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Graphical tools for macromolecular crystallography in PHENIX

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Evaluating the solution from MrBUMP and BALBES.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Improvement of molecular-replacement models with Sculptor

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

MrBUMP: an automated pipeline for molecular replacement

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

Crystal structure of a clip-domain serine protease and functional roles of the clip domains

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3817702

AMPLE: a cluster-and-truncate approach to solve the crystal structures of small proteins using rapidly computed ab initio models.

3 June 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913022750

The Computational Crystallography Toolbox: crystallographic algorithms in a reusable software framework

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913022750

The importance of alignment accuracy for molecular replacement.

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913022750

Iterative model building, structure refinement and density modification with the PHENIX AutoBuild wizard

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913022750

10.1107/S0907444913022750

21 January 2018

Identifiers

DOI

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24189240%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24189240%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

2 references