Non-coding RNA and its potential role in Mycobacterium tuberculosis pathogenesis (Q28727945)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22546938%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

review article

0 references

title

Non-coding RNA and its potential role in Mycobacterium tuberculosis pathogenesis (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22546938%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

0 references

1 reference

0 references

Mycobacterium tuberculosis

0 references

1 reference

2 November 2019

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22546938%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

author name string

Douglas Young

series ordinal

2

1 reference

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language of work or name

English

0 references

publication date

1 April 2012

3 references

23 March 2019

2 November 2019

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30 January 2020

3 references

23 March 2019

2 November 2019

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30 January 2020

volume

9

1 reference

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30 January 2020

issue

4

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30 January 2020

page(s)

427-436

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Creative Commons Attribution-NonCommercial 3.0 Unported

30 January 2020

copyright license

2 references

23 March 2019

Cholesterol catabolism by Mycobacterium tuberculosis requires transcriptional and metabolic adaptations

2 November 2019

cites work

1 reference

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Sequence-based analysis uncovers an abundance of non-coding RNA in the total transcriptome of Mycobacterium tuberculosis

17 March 2017

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A Salmonella small non-coding RNA facilitates bacterial invasion and intracellular replication by modulating the expression of virulence factors

17 March 2017

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"Pseudo-Beijing": evidence for convergent evolution in the direct repeat region of Mycobacterium tuberculosis

17 March 2017

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Regulation by small RNAs in bacteria: expanding frontiers

17 March 2017

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Riboswitches and the RNA world

17 March 2017

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Portrait of a pathogen: the Mycobacterium tuberculosis proteome in vivo

17 March 2017

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17 March 2017

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Integrating anaerobic/aerobic sensing and the general stress response through the ArcZ small RNA

17 March 2017

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Regulatory RNA in bacterial pathogens

17 March 2017

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A Staphylococcus aureus small RNA is required for bacterial virulence and regulates the expression of an immune-evasion molecule

17 March 2017

1 reference

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Evidence for widespread gene control function by the ydaO riboswitch candidate

17 March 2017

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The primary transcriptome of the major human pathogen Helicobacter pylori

17 March 2017

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Small RNAs and small proteins involved in resistance to cell envelope stress and acid shock in Escherichia coli: analysis of a bar-coded mutant collection

17 March 2017

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Characterization of a Mycobacterium tuberculosis ESX-3 conditional mutant: essentiality and rescue by iron and zinc

17 March 2017

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Analysis of pools of targeted Salmonella deletion mutants identifies novel genes affecting fitness during competitive infection in mice

17 March 2017

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Identification of small RNAs in Mycobacterium tuberculosis

17 March 2017

1 reference

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The Listeria transcriptional landscape from saprophytism to virulence.

17 March 2017

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Regulatory RNAs in bacteria

17 March 2017

1 reference

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Gene dosage compensation calibrates four regulatory RNAs to control Vibrio cholerae quorum sensing

17 March 2017

1 reference

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The Bacillus subtilis iron-sparing response is mediated by a Fur-regulated small RNA and three small, basic proteins

17 March 2017

1 reference

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A new Vibrio cholerae sRNA modulates colonization and affects release of outer membrane vesicles

17 March 2017

1 reference

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Cytological and transcript analyses reveal fat and lazy persister-like bacilli in tuberculous sputum

17 March 2017

1 reference

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The enduring hypoxic response of Mycobacterium tuberculosis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

Structure and mechanism of a metal-sensing regulatory RNA

17 March 2017

1 reference

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Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline

17 March 2017

1 reference

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Mycobacterium tuberculosis DosS is a redox sensor and DosT is a hypoxia sensor

17 March 2017

1 reference

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SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay

17 March 2017

1 reference

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CsrB sRNA family: sequestration of RNA-binding regulatory proteins

17 March 2017

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No detectable effect of RNA-binding protein Hfq absence in Staphylococcus aureus

17 March 2017

1 reference

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The Mycobacterium tuberculosis PhoPR two-component system regulates genes essential for virulence and complex lipid biosynthesis

17 March 2017

1 reference

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17 March 2017

1 reference

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6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter

17 March 2017

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Mycobacterium tuberculosis pks12 produces a novel polyketide presented by CD1c to T cells

17 March 2017

1 reference

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New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control

17 March 2017

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The Mycobacterium tuberculosis ino1 gene is essential for growth and virulence

17 March 2017

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Transcriptional Adaptation of Mycobacterium tuberculosis within Macrophages: Insights into the Phagosomal Environment

17 March 2017

1 reference

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Regulation of the vitamin B12 metabolism and transport in bacteria by a conserved RNA structural element

17 March 2017

1 reference

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Genes required for mycobacterial growth defined by high density mutagenesis

17 March 2017

1 reference

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Genetic control by a metabolite binding mRNA

17 March 2017

1 reference

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Evaluation of a nutrient starvation model of Mycobacterium tuberculosis persistence by gene and protein expression profiling

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

Novel small RNA-encoding genes in the intergenic regions of Escherichia coli

17 March 2017

1 reference

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Regulation of the Mycobacterium tuberculosis hypoxic response gene encoding α-crystallin

17 March 2017

1 reference

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Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence

17 March 2017

1 reference

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Genetic requirements for mycobacterial survival during infection

17 March 2017

1 reference

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Hfq and its constellation of RNA

7 April 2017

1 reference

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Evolution and classification of the CRISPR-Cas systems

7 April 2017

1 reference

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CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA

7 April 2017

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Inhibition of respiration by nitric oxide induces a Mycobacterium tuberculosis dormancy program

7 April 2017

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The spectrum of latent tuberculosis: rethinking the biology and intervention strategies

7 April 2017

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Genome-wide definition of the SigF regulon in Mycobacterium tuberculosis

7 April 2017

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Genome-wide antisense transcription drives mRNA processing in bacteria

3 June 2018

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The PE/PPE multigene family codes for virulence factors and is a possible source of mycobacterial antigenic variation: perhaps more?

3 June 2018

1 reference

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Mycobacterium tuberculosis Beijing genotype: a template for success.

3 June 2018

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Dual-function RNA regulators in bacteria

3 June 2018

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Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems

3 June 2018

1 reference

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Characterization and transcriptome analysis of Mycobacterium tuberculosis persisters

3 June 2018

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RNIE: genome-wide prediction of bacterial intrinsic terminators

3 June 2018

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Mycobacterium bovis lipids: virulence and vaccines

3 June 2018

1 reference

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aprABC: a Mycobacterium tuberculosis complex-specific locus that modulates pH-driven adaptation to the macrophage phagosome

3 June 2018

1 reference

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A highly conserved protein of unknown function in Sinorhizobium meliloti affects sRNA regulation similar to Hfq.

3 June 2018

1 reference

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The suboptimal structures find the optimal RNAs: homology search for bacterial non-coding RNAs using suboptimal RNA structures

3 June 2018

1 reference

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Hfq is a global regulator that controls the pathogenicity of Staphylococcus aureus

3 June 2018

1 reference

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Bacterial antisense RNAs: how many are there, and what are they doing?

3 June 2018

1 reference

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Base pairing small RNAs and their roles in global regulatory networks

3 June 2018

1 reference

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Mycobacterium tuberculosis persistence mutants identified by screening in isoniazid-treated mice

3 June 2018

1 reference

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CRISPR/Cas system and its role in phage-bacteria interactions

3 June 2018

1 reference

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Legionella pneumophila 6S RNA optimizes intracellular multiplication

3 June 2018

1 reference

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Multiple small RNAs identified in Mycobacterium bovis BCG are also expressed in Mycobacterium tuberculosis and Mycobacterium smegmatis

3 June 2018

1 reference

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The role of Hfq in bacterial pathogens

3 June 2018

1 reference

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A trans-acting riboswitch controls expression of the virulence regulator PrfA in Listeria monocytogenes

3 June 2018

1 reference

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In vivo expression and purification of aptamer-tagged small RNA regulators

3 June 2018

1 reference

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igr Genes and Mycobacterium tuberculosis cholesterol metabolism

3 June 2018

1 reference

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Spoligotyping for molecular epidemiology of the Mycobacterium tuberculosis complex

3 June 2018

1 reference

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Mycobacterial survival strategies in the phagosome: defence against host stresses

3 June 2018

1 reference

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Translational repression contributes greater noise to gene expression than transcriptional repression

3 June 2018

1 reference

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Small membrane proteins found by comparative genomics and ribosome binding site models.

3 June 2018

1 reference

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TB database: an integrated platform for tuberculosis research

3 June 2018

1 reference

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Comparative genomic analysis of T-box regulatory systems in bacteria

3 June 2018

1 reference

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The role of resuscitation promoting factors in pathogenesis and reactivation of Mycobacterium tuberculosis during intra-peritoneal infection in mice

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

6S RNA: a regulator of transcription

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

MgtC: a key player in intramacrophage survival

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

6S RNA: a small RNA regulator of transcription

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

A riboswitch regulates expression of the coenzyme B12-independent methionine synthase in Mycobacterium tuberculosis: implications for differential methionine synthase function in strains H37Rv and CDC1551.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

Wake up! Peptidoglycan lysis and bacterial non-growth states.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

Proteins of the Rpf (resuscitation promoting factor) family are peptidoglycan hydrolases.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

Compiling a molecular inventory for Mycobacterium bovis BCG at two growth rates: evidence for growth rate-mediated regulation of ribosome biosynthesis and lipid metabolism

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

Effect of growth state on transcription levels of genes encoding major secreted antigens of Mycobacterium tuberculosis in the mouse lung

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

Functional and evolutionary genomics of Mycobacterium tuberculosis: insights from genomic deletions in 100 strains

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

Comparative genomics of the vitamin B12 metabolism and regulation in prokaryotes.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

Regulation of the Escherichia coli hfq gene encoding the host factor for phage Q beta

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

Ribosomal genes in Escherichia coli

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3384566

RNAs: regulators of bacterial virulence

3 June 2018

1 reference

On the facultative requirement of the bacterial RNA chaperone, Hfq.

21 January 2018

1 reference

Hfq and Hfq-dependent small RNAs are major contributors to multicellular development in Salmonella enterica serovar Typhimurium.

21 January 2018

1 reference

xBASE2: a comprehensive resource for comparative bacterial genomics.

21 January 2018

1 reference

Characterization of the Mycobacterium tuberculosis proteome by liquid chromatography mass spectrometry-based proteomics techniques: a comprehensive resource for tuberculosis research

21 January 2018

1 reference

Alternate paradigm for intrinsic transcription termination in eubacteria.

21 January 2018

1 reference

Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22546938

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.4161/RNA.20105

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22546938%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22546938%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22546938%20AND%20SRC:MED&resulttype=core&format=json