Two new rapid SNP-typing methods for classifying mycobacterium tuberculosis complex into the main phylogenetic lineages (Q28728992)

8 April 2024

9

Iñaki Comas

Iñaki

Comas

1 reference

8 April 2024

David Stucki

1

David

Stucki

1 reference

8 April 2024

8

Lukas Fenner

Lukas

Fenner

1 reference

8 April 2024

11

Sebastien Gagneux

Sebastien

Gagneux

1 reference

8 April 2024

Yeboah-Manu, D.

0 references

Bijaya Malla

2

Bijaya

Malla

1 reference

8 April 2024

Simon Hostettler

3

Simon

Hostettler

1 reference

8 April 2024

Thembela Huna

4

Thembela

Huna

1 reference

8 April 2024

Julia Feldmann

5

Julia

Feldmann

1 reference

8 April 2024

Sonia Borrell

7

Sonia

Borrell

1 reference

8 April 2024

Mireia Coscollà

10

Mireia

Coscollà

1 reference

Creative Commons Attribution 4.0 International

8 April 2024

Stucki, D.

0 references

Malla, B.

0 references

Hostettler, S.

0 references

Huna, T.

0 references

Feldmann, J.

0 references

Gagneux, S.

0 references

language of work or name

English

0 references

publication date

2012

0 references

published in

PLOS One

0 references

volume

7

0 references

issue

7

0 references

page(s)

e41253

0 references

copyright license

start time

20 July 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

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Human macrophage responses to clinical isolates from the Mycobacterium tuberculosis complex discriminate between ancient and modern lineages

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3 June 2018

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3 June 2018

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3 June 2018

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3 June 2018

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3 June 2018

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3 June 2018

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Development of multiplex assay for rapid characterization of Mycobacterium tuberculosis.

3 June 2018

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3 June 2018

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3 June 2018

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3 June 2018

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3 June 2018

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Beijing genotype of Mycobacterium tuberculosis is significantly associated with human immunodeficiency virus infection and multidrug resistance in cases of tuberculous meningitis

3 June 2018

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Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: insights into tuberculosis evolution, phylogenetic accuracy of other DNA fingerprinting systems, and recommendations for a minimal standard SNP se

3 June 2018

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3 June 2018

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Silent nucleotide polymorphisms and a phylogeny for Mycobacterium tuberculosis

3 June 2018

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Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales

3 June 2018

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Phylogenetic discovery bias in Bacillus anthracis using single-nucleotide polymorphisms from whole-genome sequencing

3 June 2018

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3 June 2018

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Functional and evolutionary genomics of Mycobacterium tuberculosis: insights from genomic deletions in 100 strains

3 June 2018

1 reference

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Transfer of a Mycobacterium tuberculosis genotyping method, Spoligotyping, from a reverse line-blot hybridization, membrane-based assay to the Luminex multianalyte profiling system

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401130

Snapshot of moving and expanding clones of Mycobacterium tuberculosis and their global distribution assessed by spoligotyping in an international study

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401130

Primer-design for multiplexed genotyping

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401130

Allele-specific PCR method based on pncA and oxyR sequences for distinguishing Mycobacterium bovis from Mycobacterium tuberculosis: intraspecific M. bovis pncA sequence polymorphism

3 June 2018

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Nature of DNA polymorphism in the direct repeat cluster of Mycobacterium tuberculosis; application for strain differentiation by a novel typing method

3 June 2018

1 reference

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Relationship between Mycobacterium tuberculosis phylogenetic lineage and clinical site of tuberculosis.

3 June 2018

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DNA fingerprinting of Mycobacterium tuberculosis: from phage typing to whole-genome sequencing.

21 January 2018

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Variable human minisatellite-like regions in the Mycobacterium tuberculosis genome

21 January 2018

1 reference

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Resolving lineage assignation on Mycobacterium tuberculosis clinical isolates classified by spoligotyping with a new high-throughput 3R SNPs based method.

21 January 2018

1 reference

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Comparison of four flow cytometric SNP detection assays and their use in plant improvement

21 January 2018

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Microbead-based immunoassay for simultaneous detection of Shiga toxins and isolation of Escherichia coli O157 in foods.

21 January 2018

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SITVITWEB--a publicly available international multimarker database for studying Mycobacterium tuberculosis genetic diversity and molecular epidemiology

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0041253

Myths and misconceptions: the origin and evolution of Mycobacterium tuberculosis

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0041253

Single-nucleotide polymorphism-based population genetic analysis of Mycobacterium tuberculosis strains from 4 geographic sites

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/22911768

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0041253

1 reference

ADS bibcode

2012PLoSO...741253S

0 references

1 reference

1 reference

1 reference