siRNA screening of a targeted library of DNA repair factors in HIV infection reveals a role for base excision repair in HIV integration (Q28741694)

1

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Rick Fishel

2

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Daria Hazuda

3

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Qian Huang

4

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Min Xu

5

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Honglin Zhou

A genome-wide short hairpin RNA screening of jurkat T-cells for human proteins contributing to productive HIV-1 replication

7

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language of work or name

English

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publication date

23 March 2011

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published in

PLOS One

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volume

6

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issue

3

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page(s)

e17612

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cites work

1 reference

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Identification of host proteins required for HIV infection through a functional genomic screen

17 March 2017

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Following the Path of the Virus: The Exploitation of Host DNA Repair Mechanisms by Retroviruses

17 March 2017

1 reference

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Retroviral DNA integration: ASLV, HIV, and MLV show distinct target site preferences

17 March 2017

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Molecular mechanisms of mammalian DNA repair and the DNA damage checkpoints

17 March 2017

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Inhibitors of strand transfer that prevent integration and inhibit HIV-1 replication in cells

17 March 2017

1 reference

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Accumulation of premutagenic DNA lesions in mice defective in removal of oxidative base damage

17 March 2017

1 reference

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Global analysis of host-pathogen interactions that regulate early-stage HIV-1 replication

17 March 2017

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Expression profiling reveals off-target gene regulation by RNAi

7 April 2017

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HIV-1 integration in the human genome favors active genes and local hotspots

7 April 2017

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The base excision repair pathway is required for efficient lentivirus integration.

7 April 2017

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Oxidative stress triggers the preferential assembly of base excision repair complexes on open chromatin regions

3 June 2018

1 reference

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The SET complex acts as a barrier to autointegration of HIV-1

3 June 2018

1 reference

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DNA repair in mammalian cells: Base excision repair: the long and short of it.

3 June 2018

1 reference

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Building mammalian signalling pathways with RNAi screens

3 June 2018

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The metabolic syndrome resulting from a knockout of the NEIL1 DNA glycosylase

3 June 2018

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Induction of OGG1 gene expression by HIV-1 Tat.

3 June 2018

1 reference

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Caffeine inhibits human immunodeficiency virus type 1 transduction of nondividing cells

3 June 2018

1 reference

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Identification of cellular cofactors for human immunodeficiency virus replication via a ribozyme-based genomics approach

3 June 2018

1 reference

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Human cell proteins and human immunodeficiency virus DNA integration

3 June 2018

1 reference

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RNA interference directed against Poly(ADP-Ribose) polymerase 1 efficiently suppresses human immunodeficiency virus type 1 replication in human cells

3 June 2018

1 reference

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Evidence that stable retroviral transduction and cell survival following DNA integration depend on components of the nonhomologous end joining repair pathway

3 June 2018

1 reference

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A naphthyridine carboxamide provides evidence for discordant resistance between mechanistically identical inhibitors of HIV-1 integrase

3 June 2018

1 reference

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siRNAs: applications in functional genomics and potential as therapeutics

3 June 2018

1 reference

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Nef does not affect the efficiency of human immunodeficiency virus type 1 fusion with target cells

3 June 2018

1 reference

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Role of the non-homologous DNA end joining pathway in the early steps of retroviral infection

3 June 2018

1 reference

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A quantitative assay for HIV DNA integration in vivo

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3063162

The HIV-1 transactivator protein Tat is a potent inducer of the human DNA repair enzyme beta-polymerase.

3 June 2018

1 reference

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Repair of gaps in retroviral DNA integration intermediates

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3063162

HIV-1 reverse transcription: a brief overview focused on structure-function relationships among molecules involved in initiation of the reaction

3 June 2018

1 reference

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A role for DNA-PK in retroviral DNA integration

3 June 2018

1 reference

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Requirement of mammalian DNA polymerase-beta in base-excision repair.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3063162

Fusion from without directed by human immunodeficiency virus particles

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3063162

Deficiencies in mouse Myh and Ogg1 result in tumor predisposition and G to T mutations in codon 12 of the K-ras oncogene in lung tumors

3 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017612

Impaired base excision repair and accumulation of oxidative base lesions in CD4+ T cells of HIV-infected patients

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017612

Roles of host cell factors in circularization of retroviral dna

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21448273

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genome-scale RNAi screen for host factors required for HIV replication

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21448273

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0017612

1 reference

4827952

ADS bibcode

2011PLoSO...617612E

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4827952

1 reference

1 reference

1 reference