Published and perished? The influence of the searched protein database on the long-term storage of proteomics data (Q28744279)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

title

Published and perished? The influence of the searched protein database on the long-term storage of proteomics data (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

0 references

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

Johannes Griss

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

Christopher Gerner

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

Juan Antonio Vizcaíno

series ordinal

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

2

Richard G Côté

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

language of work or name

English

0 references

publication date

23 June 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

Molecular & Cellular Proteomics

5 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

volume

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

page(s)

M111.008490

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

issue

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

Reactome: a database of reactions, pathways and biological processes

5 February 2020

cites work

1 reference

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Ongoing and future developments at the Universal Protein Resource

16 March 2017

1 reference

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16 March 2017

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The RCSB Protein Data Bank: redesigned web site and web services

16 March 2017

1 reference

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The Proteomics Identifications database: 2010 update

16 March 2017

1 reference

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The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts

16 March 2017

1 reference

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The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases

16 March 2017

1 reference

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Database resources of the National Center for Biotechnology Information

16 March 2017

1 reference

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NCBI Reference Sequences: current status, policy and new initiatives

16 March 2017

1 reference

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The International Protein Index: an integrated database for proteomics experiments

7 April 2017

1 reference

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Tranche distributed repository and ProteomeCommons.org

7 April 2017

1 reference

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Differential metabolic response of cultured rice (Oryza sativa) cells exposed to high- and low-temperature stress

3 June 2018

1 reference

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MASPECTRAS 2: An integration and analysis platform for proteomic data.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

ms_lims, a simple yet powerful open source laboratory information management system for MS-driven proteomics.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

PRIDE Converter: making proteomics data-sharing easy

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

A HUPO test sample study reveals common problems in mass spectrometry-based proteomics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

The proteios software environment: an extensible multiuser platform for management and analysis of proteomics data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

Selectivity in enrichment of cAMP-dependent protein kinase regulatory subunits type I and type II and their interactors using modified cAMP affinity resins.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

Design, implementation and maintenance of a model organism database for Arabidopsis thaliana

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

The vertebrate genome annotation (Vega) database

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

Proteome map of the normal murine ventricular myocardium

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

HUPO Brain Proteome Project: summary of the pilot phase and introduction of a comprehensive data reprocessing strategy

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

Interpretation of shotgun proteomic data: the protein inference problem

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

Large-scale database searching using tandem mass spectra: looking up the answer in the back of the book

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

Protein identification from tandem mass spectra by database searching.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

Online automated in vivo zebrafish phosphoproteomics: from large-scale analysis down to a single embryo

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186200

Differential detergent fractionation for non-electrophoretic eukaryote cell proteomics

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21700957

12 December 2020

inferred from PubMed ID database lookup

Quantitative proteomics analysis of the secretory pathway

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21700957

12 December 2020

inferred from PubMed ID database lookup

Proteomic analysis of human gastric juice: a shotgun approach

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21700957

12 December 2020

inferred from PubMed ID database lookup

Apollo scientist dusts off 'lost' lunar data

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1074/MCP.M111.008490

Identifiers

DOI

10.1074/MCP.M111.008490

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

release_oddgc4k5hzdifi7eg5vks53wf4

5 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/oddgc4k5hzdifi7eg5vks53wf4

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21700957%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

1 reference