PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows (Q36638849)

15 August 2017

1 reference

title

PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows (English)

1 reference

15 August 2017

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2

Henry Lam

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15 August 2017

3

Ruedi Aebersold

1 reference

15 August 2017

1

Eric W Deutsch

1 reference

15 August 2017

1 May 2008

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15 August 2017

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15 August 2017

9

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15 August 2017

429-434

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15 August 2017

5

1 reference

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

15 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

Development and validation of a spectral library searching method for peptide identification from MS/MS.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

Improving gene annotation using peptide mass spectrometry

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

SBEAMS-Microarray: database software supporting genomic expression analyses for systems biology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

A uniform proteomics MS/MS analysis platform utilizing open XML file formats

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

Mass spectrometry and protein analysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

30 September 2017

The PeptideAtlas project

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

Dynamic spectrum quality assessment and iterative computational analysis of shotgun proteomic data: toward more efficient identification of post-translational modifications, sequence polymorphisms, and novel peptides

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

PRIDE: the proteomics identifications database

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

Scoring proteomes with proteotypic peptide probes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

Open source system for analyzing, validating, and storing protein identification data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

An improved model for prediction of retention times of tryptic peptides in ion pair reversed-phase HPLC: its application to protein peptide mapping by off-line HPLC-MALDI MS.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

TANDEM: matching proteins with tandem mass spectra

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

A statistical model for identifying proteins by tandem mass spectrometry

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373374

Absolute quantification of specific proteins in complex mixtures using visible isotope-coded affinity tags

30 September 2017

1 reference

https://api.crossref.org/works/10.1038%2FEMBOR.2008.56

Computational prediction of proteotypic peptides for quantitative proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOR.2008.56

The need for a public proteomics repository.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOR.2008.56

A computational approach toward label-free protein quantification using predicted peptide detectability.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOR.2008.56

Multiplexed absolute quantification for proteomics using concatenated signature peptides encoded by QconCAT genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOR.2008.56

High sensitivity detection of plasma proteins by multiple reaction monitoring of N-glycosites

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18451766

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/EMBOR.2008.56

1 reference

15 August 2017

1 reference

15 August 2017

1 reference

PMCID

2373374