Analysis of gene expression in resynthesized Brassica napus Allopolyploids using arabidopsis 70mer oligo microarrays (Q28755235)

2

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J C Pires

3

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R W Doerge

4

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Z Jeffrey Chen

5

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Thomas C Osborn

Creative Commons Attribution 4.0 International

6

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language of work or name

English

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publication date

2009

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published in

PLOS One

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volume

4

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issue

3

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page(s)

e4760

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copyright license

start time

10 March 2009

1 reference

April 2022 Public Data File from Crossref

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Numerous and rapid nonstochastic modifications of gene products in newly synthesized Brassica napus allotetraploids

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Mechanisms of genomic rearrangements and gene expression changes in plant polyploids

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Reliability and reproducibility issues in DNA microarray measurements

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Polyploid Incidence and Evolution

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Stomatal size in fossil plants: evidence for polyploidy in majority of angiosperms

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Partitioned expression of duplicated genes during development and evolution of a single cell in a polyploid plant

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

The development of an Arabidopsis model system for genome-wide analysis of polyploidy effects

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Phenotypic and transcriptomic changes associated with potato autopolyploidization

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Polyploidy: genome obesity and its consequences

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Differential regulation of gene products in newly synthesized Brassica napus allotetraploids is not related to protein function nor subcellular localization

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Sensitivity of 70-mer oligonucleotides and cDNAs for microarray analysis of gene expression in Arabidopsis and its related species

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

On the abundance of polyploids in flowering plants

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

A novel approach for characterizing expression levels of genes duplicated by polyploidy

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Evolution and expression of homeologous loci in Tragopogon miscellus (Asteraceae), a recent and reciprocally formed allopolyploid

3 June 2018

1 reference

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Microarray analysis of the transcriptome as a stepping stone towards understanding biological systems: practical considerations and perspectives

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Genomewide nonadditive gene regulation in Arabidopsis allotetraploids

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Novel patterns of gene expression in polyploid plants

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Development of anonymous cDNA microarrays to study changes to the Senecio floral transcriptome during hybrid speciation.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Methods for genome-wide analysis of gene expression changes in polyploids

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Chromosomal locus rearrangements are a rapid response to formation of the allotetraploid Arabidopsis suecica genome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Understanding mechanisms of novel gene expression in polyploids

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Gene loss, silencing and activation in a newly synthesized wheat allotetraploid.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Allopolyploidy-induced rapid genome evolution in the wheat (Aegilops-Triticum) group

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

Protein-coding genes are epigenetically regulated in Arabidopsis polyploids

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2651575

PATHWAYS, MECHANISMS, AND RATES OF POLYPLOID FORMATION IN FLOWERING PLANTS

3 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004760

Neopolyploidy in Flowering Plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004760

Plant polyploidy: gene expression and genetic redundancy

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004760

ON THE ABUNDANCE OF POLYPLOIDS IN FLOWERING PLANTS

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004760

Genetic and epigenetic consequences of recent hybridization and polyploidy in Spartina (Poaceae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004760

Phenotypic instability and rapid gene silencing in newly formed arabidopsis allotetraploids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004760

Patterns of sequence loss and cytosine methylation within a population of newly resynthesized Brassica napus allopolyploids

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004760

Alteration of the embryo transcriptome of hexaploid winter wheat (Triticum aestivum cv. Mercia) during maturation and germination

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004760

Transcriptome shock after interspecific hybridization in senecio is ameliorated by genome duplication

21 January 2018

1 reference

12 December 2020

Measuring global gene expression in polyploidy; a cautionary note from allohexaploid wheat

1 reference

12 December 2020

Identification of the A and C genomes of amphidiploid Brassica napus (oilseed rape)

1 reference

12 December 2020

Timing and rate of genome variation in triticale following allopolyploidization

1 reference

12 December 2020

Collinearity between a 30-centimorgan segment of Arabidopsis thaliana chromosome 4 and duplicated regions within the Brassica napus genome

1 reference

12 December 2020

Analysis of gene expression profiles in response to Sclerotinia sclerotiorum in Brassica napus

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0004760

Identifiers

DOI

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2351890

ADS bibcode

2009PLoSO...4.4760G

0 references

OpenCitations bibliographic resource ID

2351890

1 reference