Important amino acid properties for determining the transition state structures of two-state protein mutants (Q30165225)

9 June 2017

Important amino acid properties for determining the transition state structures of two-state protein mutants (English)

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9 June 2017

1

M Michael Gromiha

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9 June 2017

S Selvaraj

2

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PubMed ID

12208519

9 June 2017

language of work or name

English

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publication date

1 August 2002

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9 June 2017

6

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based on heuristic

inferred from page(s)

published in

FEBS Letters

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9 June 2017

526

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9 June 2017

1-3

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9 June 2017

129-134

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The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding

9 June 2017

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Important role of hydrogen bonds in the structurally polarized transition state for folding of the src SH3 domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Mapping the interactions present in the transition state for unfolding/folding of FKBP12.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Cooperativity in protein-folding kinetics

21 January 2018

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https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Different folding transition states may result in the same native structure

21 January 2018

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https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Mechanism of protein folding

21 January 2018

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https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Measuring residue associations in protein structures. Possible implications for protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Identification of side-chain clusters in protein structures by a graph spectral method.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Structure-based conformational preferences of amino acids

21 January 2018

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https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Important amino acid properties for enhanced thermostability from mesophilic to thermophilic proteins

21 January 2018

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https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Importance of surrounding residues for protein stability of partially buried mutations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

21 January 2018

The Protein Data Bank

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https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Hydrophobic characteristics of folded proteins

21 January 2018

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https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Influence of medium and long range interactions in different structural classes of globular proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Prediction of the activity and stability effects of site-directed mutagenesis on a protein core

21 January 2018

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https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

NETASA: neural network based prediction of solvent accessibility.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Comparison between long-range interactions and contact order in determining the folding rate of two-state proteins: application of long-range order to folding rate prediction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Folding rate prediction using total contact distance

21 January 2018

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https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Effect of cavity-creating mutations in the hydrophobic core of chymotrypsin inhibitor 2

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Identification and characterization of the unfolding transition state of chymotrypsin inhibitor 2 by molecular dynamics simulations

21 January 2018

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https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

The Structure of the Transition State for Folding of Chymotrypsin Inhibitor 2 Analysed by Protein Engineering Methods: Evidence for a Nucleation-condensation Mechanism for Protein Folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

The formation of a native-like structure containing eight conserved hydrophobic residues is rate limiting in two-state protein folding of ACBP

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

An analysis of the amino acid clustering pattern in (alpha/beta)8 barrel proteins

21 January 2018

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https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Role of structural and sequence information in the prediction of protein stability changes: comparison between buried and partially buried mutations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Importance of mutant position in Ramachandran plot for predicting protein stability of surface mutations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Relationship between amino acid properties and protein stability: buried mutations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Analysis of amino acid indices and mutation matrices for sequence comparison and structure prediction of proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Importance of long-range interactions in protein folding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Folding pathway of FKBP12 and characterisation of the transition state

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

Structural class prediction: an application of residue distribution along the sequence

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0014-5793%2802%2903122-8

10.1016/S0014-5793(02)03122-8

7 January 2021

Identifiers

DOI

1 reference

9 June 2017

1 reference

PubMed ID

12208519